Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3965 |
Symbol | |
ID | 5060446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4517371 |
End bp | 4518345 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640476225 |
Product | hypothetical protein |
Protein accession | YP_001160773 |
Protein GI | 145596476 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | [TIGR03620] probable F420-dependent oxidoreductase, MSMEG_4141 family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGAGAA CTTCTCCAGA TCGTACCGGT GACATGCACC ACCGGGAGAC CGACACAAGC GACAGTCACC GAGGGCTCGG GCGAGTCGGC ATCTGGACCA TGGCGTTCGA CTGGCAGCCA GCCGGGCTCG TCCGCGACGC AACCGCCGAG TTGGAGGAAC TCGGCTACGG TGCGGTGTGG TATGCCGAGG GTCTCGGCCG CGACGCGGTC AGCCAGGCAT GGCTCATCCT GGGCAACACC CGGCGGCTGG TCGTCGGAGC GGGCGTCGCC AACATCGCCG CGCGGGAACC AATCGCGATG GCCGCGGCCC ACCGTGCGCT GGACGATGCG TTCGCGGGAC GGTTCGTGCT GGGACTCGGC GGACATCGAA CCCACGACAC CCCGACCAGC ACTATCCCAG GGCGCTACGG ACGACCGGTA CAGACGATGA CCGCCTACCT CGACGCCATG GACGCCGCCA CCACCGTGCT TCCCGAGCCA ACGGGTCCTC GCCGCCGGGT CCTCGCCGCG CTCGGCCCCA GAATGACCGA ACTCGCCGCA CAACGCACCG AGGGCGCCCT GCCCTACTTC GCACCCGTCG AACACACTCG CCGCACCCGG GAGGGCATGG GACCTGGCCC ACTGCTCGCA GTGGAACTCG CGGTCGCCCT CGCCGACGAT CCCGATCGAG CACGGCAGCT GGCCCGCGAC CATGTCGCCC ACTACACCTC CACCGCCCCG CACCAGGCCG CCAATCTGCG TCGCCTGGGC TTCACCGAAC AGGACATGCG GGGGCTGAGT AGCACCCTGG TCGACGCCGT GGTCGCGCAC GGCGACCTCG ACGCGGTACG CACCCGCGTG CGTGAGCACC TGGACGCAGG CGCAAACCAC GTCTGCATCC AGGTGCTCAC GGCGGATCCG GCCGCGCTGC CCATGGACGA GTGGCGGGAG CTGGCGTTCC TCACCACCGA GGCGACGACA TCGAGCGTCG GTTGA
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Protein sequence | MRRTSPDRTG DMHHRETDTS DSHRGLGRVG IWTMAFDWQP AGLVRDATAE LEELGYGAVW YAEGLGRDAV SQAWLILGNT RRLVVGAGVA NIAAREPIAM AAAHRALDDA FAGRFVLGLG GHRTHDTPTS TIPGRYGRPV QTMTAYLDAM DAATTVLPEP TGPRRRVLAA LGPRMTELAA QRTEGALPYF APVEHTRRTR EGMGPGPLLA VELAVALADD PDRARQLARD HVAHYTSTAP HQAANLRRLG FTEQDMRGLS STLVDAVVAH GDLDAVRTRV REHLDAGANH VCIQVLTADP AALPMDEWRE LAFLTTEATT SSVG
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