| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3936 |
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| Symbol | rplA |
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| ID | 5060414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4490592 |
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| End bp | 4491308 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640476193 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001160744 |
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| Protein GI | 145596447 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCACA GCAAGAACTA CCGTAAGGCG GCTGCGGCCA TCGACCGGTC GAAGCTGTAC
ACGCCCGCCG AGGCCGTCAA GCTGGCCAAG GAGACCACCT CCGTCAAGTT CGACGCCACG
GTCGAGGTCG CGATGCGCCT CGGCGTCGAC CCGCGTAAGG CGGACCAGAT GGTTCGCGGC
ACGGTCAACC TGCCGCACGG CACGGGTAAG ACCGCGCGTG TGATCGTGTT CGCCGCCGGC
GCGAAGGCCG AGGAGGCCGT CGCCGCGGGT GCCGACGAGG TAGGCACGGA CGAGCTGGTC
GCCCGGATCC AGGGCGGATG GCTTGATTTC GACGCCGCGA TCGCCACGCC GGACCAGATG
GCCAAGATCG GTCGGATCGC GCGGATCCTG GGCCCGCGCG GTCTCATGCC GAACCCGAAG
ACCGGCACGG TGACGATGAA CGTCACCAAG GCCGTTGCGG ACATCAAGGG CGGGAAGATC
GCTTTCCGGG TGGACAAGCA CTCCAACCTG CACCTGATCA TCGGCAAGGC CTCGTTCTCC
GAGAGCCAGC TGGTGGACAA CTACGCTGCG GTTCTCGACG AGATCCTGCG GGCGAAGCCG
TCCGCGGCCA AGGGTAAGTA CCTGAGGAAG GTCACCCTCA CCACCACGAT GGGCCCGGGT
GTTCCGATCG ACCCGAACGT GGTGAAGAAC CTGCGGGAGA ACTCCGCCGA GGGCTGA
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| Protein sequence | MQHSKNYRKA AAAIDRSKLY TPAEAVKLAK ETTSVKFDAT VEVAMRLGVD PRKADQMVRG
TVNLPHGTGK TARVIVFAAG AKAEEAVAAG ADEVGTDELV ARIQGGWLDF DAAIATPDQM
AKIGRIARIL GPRGLMPNPK TGTVTMNVTK AVADIKGGKI AFRVDKHSNL HLIIGKASFS
ESQLVDNYAA VLDEILRAKP SAAKGKYLRK VTLTTTMGPG VPIDPNVVKN LRENSAEG
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