Gene Strop_3931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3931 
Symbol 
ID5060409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4480766 
End bp4481149 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content67% 
IMG OID640476188 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001160739 
Protein GI145596442 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.594779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.532248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGGTGT CGGTGCCGGA CGGTACCGTC CCCGGCATGT CTGACAGTCC GTTGCGTAGG 
GTAGACACCG TCTTCGTCAA GGTTGACGAT CCACATGCTG TGGCCGGGTG GTACCAGGAG
ACCCTGGGCT GGCCGGAGCT CTTCCGTACC TCGCACATCG TGGTGCTCCA GGCGCCCGAG
GGCCCACCGG TGACCCTGCT CAACCCGGCG GGGGGCGAGT GGTCTGGTTT CAACTTCCAC
GCCCCCGACG CCGCCGCGGC CCGCCAATGG CTGATCGAGC GGGGGGCCGA GGTCGGCGAG
CTGAACCAGG CCCCTGATCA GCCGGTGACC TGGTTCTGGT TCCGTGATCC GCTTGGCAAC
CGGCTCGAGG TCTGTTCCTA CTGA
 
Protein sequence
MAVSVPDGTV PGMSDSPLRR VDTVFVKVDD PHAVAGWYQE TLGWPELFRT SHIVVLQAPE 
GPPVTLLNPA GGEWSGFNFH APDAAAARQW LIERGAEVGE LNQAPDQPVT WFWFRDPLGN
RLEVCSY