Gene Strop_3927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3927 
Symbol 
ID5060405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4478319 
End bp4478789 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content69% 
IMG OID640476184 
Product30S ribosomal protein S7 
Protein accessionYP_001160735 
Protein GI145596438 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.481009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.54181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTA AGGGACCCGC TCCGCGGCGG CCGCTGGTCG CTGACCCGGT GTACAACTCG 
CCGCTGGTCA CCCAGTTGGT GAACAAGATT CTGCTGCGTG GCAAGCGTCA GCTGGCCGAG
ACCCTCGTCT ACGCGGCGCT GGAGGGCTGC CGGGAGAAGT CCGGCACCGA CCCGGTGGTC
ACCCTCAAGC GAGCGATGGA CAACGTCAAG CCGACGCTCG AGGTGCGCAG CCGCCGAGTC
GGTGGCGCCA CCTACCAGGT GCCGGTCGAG GTTCGCCCGG CCCGCGCCAC CACCCTGGGC
CTGCGCTGGC TGGTCACCTA CGCCCGCGCC CGGCGCGAGA AGACCATGGT TGAGCGGCTG
ATGAACGAGC TGCTGGACGC GAGTAACGGT CTCGGTGCCG CCGTCAAGCG GCGCGAGGAC
ACCCACAAGA TGGCCGAGTC CAACAAGGCC TTCGCGCACT ACCGCTGGTA A
 
Protein sequence
MPRKGPAPRR PLVADPVYNS PLVTQLVNKI LLRGKRQLAE TLVYAALEGC REKSGTDPVV 
TLKRAMDNVK PTLEVRSRRV GGATYQVPVE VRPARATTLG LRWLVTYARA RREKTMVERL
MNELLDASNG LGAAVKRRED THKMAESNKA FAHYRW