| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3923 |
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| Symbol | rplC |
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| ID | 5060401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4473405 |
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| End bp | 4474064 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640476180 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001160731 |
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| Protein GI | 145596434 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAGGC AAGTCAAGGG GATCCTGGGC GCGAAGCTCG GCATGACCCA GGTCTGGGAC
AACAACCGTG TTGTCCCGGT GACTGTGGTG CAGGCCGGCC CGTGTGTCGT CAGCCAGGTC
CGTAGCCAGG AGAAGGACGG CTACGCGGCG GTCCAGTTGG CGTATGGCGC CATCGACCCA
CGCAAGGTCA AGAAGCCGAT CAGCGGTCAC TACGCAAAGG CCGATGTCGC GCCGCGCCGG
CACATCGTCG AGCTGCGCAC GACCGACGCC GGCGAGTACT CGTCCGGCCA GGAGGTCACG
GTCGAGGAGT TCCCGGCCGG TATCTCGGTC GACGTGACCG GAAAGACCAA GGGCAAGGGC
TACGCCGGCC CGATGAAGCG GCACGGCTTC CACGGCCTGC GCGCCAGCCA CGGTGTGGAG
CGCAAGCACC GCTCGCCGGG CTCGATCGGC GGCTGCGCCA CTCCGGGACG TGTCTTCAAG
GGCACCCGGA TGGCCGGCCG GATGGGTGGT GTGCGCTACA CCGTCCAGAA CCTGACCGTC
CAGGCGGTTG ACACCGAGAA CAATCTCCTG CTCGTCCGTG GTGCCATCCC TGGCCCCAAG
GGCGCGCTGG TCCTGGTTCG CACTGCGGCC AAGGCGAAGA AGGGTGGGGC AGCCAAGTGA
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| Protein sequence | MDRQVKGILG AKLGMTQVWD NNRVVPVTVV QAGPCVVSQV RSQEKDGYAA VQLAYGAIDP
RKVKKPISGH YAKADVAPRR HIVELRTTDA GEYSSGQEVT VEEFPAGISV DVTGKTKGKG
YAGPMKRHGF HGLRASHGVE RKHRSPGSIG GCATPGRVFK GTRMAGRMGG VRYTVQNLTV
QAVDTENNLL LVRGAIPGPK GALVLVRTAA KAKKGGAAK
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