Gene Strop_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3922 
Symbol 
ID5060400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4472758 
End bp4473408 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID640476179 
Productribosomal protein L4/L1e 
Protein accessionYP_001160730 
Protein GI145596433 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCG TTGATGTCCT CACCGTCGAA GGCACCAAGG CCGGCTCCGT CGAGTTGCCC 
GCTGACATCT TCGACGCGCA GGCCAACATC GCGCTGATGC ACCAGGTTGT GGTGGCTCAG
CTTGCGGCGG CCCGACAGGG CACGCACAAG ACCAAGACGC GGGGCGAGGT TGCCGGCGGC
GGCAAGAAGC CCTACAAGCA GAAGGGCACC GGCCGGGCCC GTCAGGGCTC GATTCGCGCC
CCGCAGTTCG CCGGGGGTGG CGTGGTCCAC GGCCCGGTGC CGCGCGACTA CAGCCAGCGG
ACCCCGAAGA AGATGAAGGC CGCCGCGCTG CGGGGTGCCC TCTCGGATCG GGCCCGCGCC
GACAAGGTGC ACGTCGTCGA AGCGTTCGTC GCCGGTGAGA AGCCGTCGAC CAAGGCCGCC
CTGGCCACCT TGGCGAAGCT GACCGAGGCG CGCCGGGTGC TGGTGGTGCT GAGCAGCACC
GATGAGCTGA ACTGGGTGTC GCTGCGCAAC GAGCCGCGGG TGCACCTGAT CGAGTCCGGC
CAGCTCAACA CGTACGACGT GCTGCTGGCC GACGACGTGG TCTTCACCAA GGAGGCCCTG
GAGGAGTTCC TGGGCGTTCC CGCTGAGACC ACCGAGGAGG GTGGCAAGTG A
 
Protein sequence
MTTVDVLTVE GTKAGSVELP ADIFDAQANI ALMHQVVVAQ LAAARQGTHK TKTRGEVAGG 
GKKPYKQKGT GRARQGSIRA PQFAGGGVVH GPVPRDYSQR TPKKMKAAAL RGALSDRARA
DKVHVVEAFV AGEKPSTKAA LATLAKLTEA RRVLVVLSST DELNWVSLRN EPRVHLIESG
QLNTYDVLLA DDVVFTKEAL EEFLGVPAET TEEGGK