Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3922 |
Symbol | |
ID | 5060400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4472758 |
End bp | 4473408 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640476179 |
Product | ribosomal protein L4/L1e |
Protein accession | YP_001160730 |
Protein GI | 145596433 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCACCG TTGATGTCCT CACCGTCGAA GGCACCAAGG CCGGCTCCGT CGAGTTGCCC GCTGACATCT TCGACGCGCA GGCCAACATC GCGCTGATGC ACCAGGTTGT GGTGGCTCAG CTTGCGGCGG CCCGACAGGG CACGCACAAG ACCAAGACGC GGGGCGAGGT TGCCGGCGGC GGCAAGAAGC CCTACAAGCA GAAGGGCACC GGCCGGGCCC GTCAGGGCTC GATTCGCGCC CCGCAGTTCG CCGGGGGTGG CGTGGTCCAC GGCCCGGTGC CGCGCGACTA CAGCCAGCGG ACCCCGAAGA AGATGAAGGC CGCCGCGCTG CGGGGTGCCC TCTCGGATCG GGCCCGCGCC GACAAGGTGC ACGTCGTCGA AGCGTTCGTC GCCGGTGAGA AGCCGTCGAC CAAGGCCGCC CTGGCCACCT TGGCGAAGCT GACCGAGGCG CGCCGGGTGC TGGTGGTGCT GAGCAGCACC GATGAGCTGA ACTGGGTGTC GCTGCGCAAC GAGCCGCGGG TGCACCTGAT CGAGTCCGGC CAGCTCAACA CGTACGACGT GCTGCTGGCC GACGACGTGG TCTTCACCAA GGAGGCCCTG GAGGAGTTCC TGGGCGTTCC CGCTGAGACC ACCGAGGAGG GTGGCAAGTG A
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Protein sequence | MTTVDVLTVE GTKAGSVELP ADIFDAQANI ALMHQVVVAQ LAAARQGTHK TKTRGEVAGG GKKPYKQKGT GRARQGSIRA PQFAGGGVVH GPVPRDYSQR TPKKMKAAAL RGALSDRARA DKVHVVEAFV AGEKPSTKAA LATLAKLTEA RRVLVVLSST DELNWVSLRN EPRVHLIESG QLNTYDVLLA DDVVFTKEAL EEFLGVPAET TEEGGK
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