Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3911 |
Symbol | rplE |
ID | 5060389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4467655 |
End bp | 4468224 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640476168 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_001160719 |
Protein GI | 145596422 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.312917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGG CTACCGAAAC CAAGACCATG CCGCGCCTCA AGGAGCGGTA CCGTAACGAG ATCGTGGGCC AGCTGCGGGA GCAGTACCAG TACGGCAACC CGATGCAGGT GCCGGGCCTG GTCAAGATCG TTGTCAACAT GGGCGTCGGC GAGGCCGCTC GGGACGCCAA GTTGATCGAC GGTGCGGTCC GCGATCTGGC CACTATCACC GGCCAGAAGC CGCAGGTTCG GCGGGCCACG AAGTCCATCG CGCAGTTCAA GCTGCGGGAG GGGATGCCGA TCGGCGCGAA GGTCACTCTG CGCGGCGACC GGATGTGGGA GTTCCTGGAC CGGCTGCTCT CCATTGCGCT GCCGCGAATC CGTGACTTCC GCGGTCTCGA CGGGCGCAAG CTCGACGGGA ACGGCAACTA CACGTTCGGT CTGACCGAGC AGTCGGTGTT CCACGAGATC GACCAGGACA AGATCGATCG CCAGCGGGGC ATGGACATCA CGGTGGTCAC CACCGCCACG ACCGACGATG AGGGCCGGGC GCTGCTCAAG TTCCTGGGCT TCCCGTTCAA GGAGAACTGA
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Protein sequence | MTTATETKTM PRLKERYRNE IVGQLREQYQ YGNPMQVPGL VKIVVNMGVG EAARDAKLID GAVRDLATIT GQKPQVRRAT KSIAQFKLRE GMPIGAKVTL RGDRMWEFLD RLLSIALPRI RDFRGLDGRK LDGNGNYTFG LTEQSVFHEI DQDKIDRQRG MDITVVTTAT TDDEGRALLK FLGFPFKEN
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