| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3820 |
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| Symbol | |
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| ID | 5060298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4376305 |
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| End bp | 4377342 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640476078 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001160629 |
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| Protein GI | 145596332 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.135433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTG ATGTGAACGT CAAGCTGGAC GCCCTGCCCG GGCTTGACTC GGATGCCCTG
CCGCTTGAGG TCAAGGATCT GCACGTCGAG TTCCGGACCC GCAACGGCAT CGCCCGCGCG
GTCAACGGCG TCAGCTTCAG TCTGCGGGCC GGCGAGACCC GAGCGATTCT CGGGGAGTCC
GGCTGCGGTA AGAGCGTCAC CGCCCAGGCG ATTATGGGGA TCCTGGACAG CCCACCCGGG
TTCGTCACCG GCGGGGAGAT CCGTTACCGC GGCGTCGACC TGCTCAAGCT GCGGGAGGCG
CAGCGGCGTA AGGTCCGCGC CAACCGGATC GCGATGATCT TCCAGGACGC CCTCTCCGCG
TTGAACCCGG TCTTCACGGT CGGCTTCCAG CTCGCAGAGC TGTTCCGCAA GCACCGGGGA
ATGTCCCGGG CGGCCAGTAA GGCGCGCGCT GTCGAGCTGC TCGACCTGGT CAAGATTCCG
GCGGCGAAGC AGCGGGTGAA CGAGTACCCG CACCAGTTCT CCGGTGGTAT GCGGCAGCGC
GTCATGATCG CTATGGCGTT GGCGCTCGAC CCGGAGGTGT TGATCGCCGA CGAGCCGACC
ACCGCCCTGG ACGTCACCGT GCAGGCCCAG ATCATGACCC TCCTCGCCGA GTTGCAGCGG
GAACGGAACA TGGGCCTGTT GCTGATCACG CACGACATGG GTGTGGTCGC CGACGTGGCG
GACCACATCT CGGTGATGTA CGCCGGCCGG GTCATTGAGG AGGCTCCGGT CCGGGACATC
TACGAGAGCC CGTCCCACCC GTACACCAAG GGCCTGCTGG AGTCGATTCC CCGCCTGGAC
CTCAAGGGCC AGGAACTCTC CGCCATCAAG GGATTGCCGC CGCTGCTGAC CGACATTCCG
AAGGGATGCG CGTTCAACCC CCGGTGCCGG TACGTGCAGG ATGCCTGCCG TCAGGACCCG
GTACCGACGC TGTATCAGGT GGCGCCGGTC CGAAGCTCCG CCTGCCACTT CTGGAAGGAG
GTCAAGGCCG ATGTCTGA
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| Protein sequence | MSTDVNVKLD ALPGLDSDAL PLEVKDLHVE FRTRNGIARA VNGVSFSLRA GETRAILGES
GCGKSVTAQA IMGILDSPPG FVTGGEIRYR GVDLLKLREA QRRKVRANRI AMIFQDALSA
LNPVFTVGFQ LAELFRKHRG MSRAASKARA VELLDLVKIP AAKQRVNEYP HQFSGGMRQR
VMIAMALALD PEVLIADEPT TALDVTVQAQ IMTLLAELQR ERNMGLLLIT HDMGVVADVA
DHISVMYAGR VIEEAPVRDI YESPSHPYTK GLLESIPRLD LKGQELSAIK GLPPLLTDIP
KGCAFNPRCR YVQDACRQDP VPTLYQVAPV RSSACHFWKE VKADV
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