| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3805 |
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| Symbol | |
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| ID | 5060283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4360175 |
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| End bp | 4360939 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640476063 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001160614 |
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| Protein GI | 145596317 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCG AGCCCCGCAC AAATCTCGCC ACACATGTCG TTGTCGTCAC CGGCGCCGGA
TCCGGCATCG GCCGTGCCAC CGCACACGCG TTCGCCCGCG CAGGCGCACG GGTACTGGGC
ATCGGCCGCC GTAAGGATGC TCTGGAGAAA ACCGCTGCCG GACACCCCGA GATCGCCGTC
CATCCAGCCG ACCTGAACGA TCCAGGAGCA CCCCAGGAAG CGATTGACGC CGCGATCGAC
CGCTGGGGAC AAGTGGACAT CCTGGTCAAC AACGCCGGAG CTACCAAGAT CATGCCGCTG
GCGCACACCA CGGCCGCGGG CATCGCCGCC CTGTTCGACC TCAACGTCGT CGCGCCCAGC
CTGCTGGCGC ACGCGGCGCT ACCGCACCTA CGTCGGAGCC GCGGCTCGAT CGTCAACGTC
TCCAGTACCT ACGGCCACCG GCCCCTGCCG GGCGCCGCCC ACTACGCAGC CTCCAAAGCC
GCCCTCGAAC AGCTCACCCG TAGCTGGGCG TTGGAACTCG CGGCTGACGG TGTTCGCGTC
AACGCCCTCG CTCCCGGACC GACCGAAAGC CAGGCGCTGG CCGCCGCCGG ACTCCCCGAC
CCGGCCATCG AAGAGATCAA ACGAGAGGAG GCCGCCCGCA TCCCCCTTGG TCGCCGAGGT
GACCCCGAAG AGGTCGCCAC CTGGATCCTG CGCCTGGCCG ACCCGGCCAG CACCTGGCTG
ACCGGGCAGA TCCTCACTGT CGACGGCGGA CTCGAGCTGA CGTGA
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| Protein sequence | MNAEPRTNLA THVVVVTGAG SGIGRATAHA FARAGARVLG IGRRKDALEK TAAGHPEIAV
HPADLNDPGA PQEAIDAAID RWGQVDILVN NAGATKIMPL AHTTAAGIAA LFDLNVVAPS
LLAHAALPHL RRSRGSIVNV SSTYGHRPLP GAAHYAASKA ALEQLTRSWA LELAADGVRV
NALAPGPTES QALAAAGLPD PAIEEIKREE AARIPLGRRG DPEEVATWIL RLADPASTWL
TGQILTVDGG LELT
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