| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3776 |
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| Symbol | |
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| ID | 5060254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4325692 |
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| End bp | 4326660 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640476034 |
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| Product | sigma-70, region 4 type 2 |
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| Protein accession | YP_001160585 |
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| Protein GI | 145596288 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.996526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGCCTC GGAGTCGCGG TGATAATGGC TCCGTGCGAC AGACACGCCA TGGTGCGGGG
GACCAGCACG AGCCCTCCTT CATGAAGCAC CGCGGAAAGT TGTACGCGGT CGCGTACCGG
ACGCTCGGCA GCGCCACGGA AGCTGAGGAC GTCGTGCAGG AGGCCTGGCT GCGCTGGAGT
CGGGTCGAAC CGGCCACCAT CGTGGATGCC GAGGCATTCT TGGTTCGGGT GACCATCCGG
CTGGCGATCG ATCAGCTGCG CAGCGCCCGG GTACGGCGTG AGGCGTACCT CGGCCCGTGG
CTGCCGGAGC CCATCCTCAC CCGAGCGGAC ATCGCCGATG ATGTGGTCCT CGCGGACTCC
GTCTCCACCG CGCTGCTGCT CGTCCTGGAG ACACTGTCAC CGATGGAACG TGCCGTGTTT
GTGCTGCACG AGGCCTTCGG ATATCCGTAC GCCGAGATCG CACACCTGTT GGGGCGGAGC
GAGCCGGCGG TGCGTCAGCT TGGGCACCGG GCTCGGAAGG CGGTGGCGAC CCGCCGCCAC
CGCTATGACA GCGACCCGAT GACCCGGCAA CAGGTGACCA CGCGATTCCT GGCGGCCTGC
TCCGATGGTG ACCTCACCGC CCTGATGGAG ATTCTGGCAC CGAGCGTGAC GATGGTCAGC
GACGGCGGTG GCCGCACGGG CGCGCCACGC AAGCCCATCC ACGGGTCGGA CCTCGTGGCC
CGTGCCATCG TCGTGCTCTC CCGGCAGCAG CCGGTGGGCT CGACGGCCGT GGTGGTGCAG
CTCAACGGCG GCCCCGGGGT CCTGGTCAGT TGTGCCGGAA CGGCGGTGCT CGCGATGACC
CTGCACCTGG TCGAGGGTCT GGTCCAGAGT ATCCAGGTGG TCAGCAACCC GCAGAAGCTG
ACAGCGGTAG CGCTGGGACC CACGACATCC CGCGCCGTGT CACACATCGC GGTGCCACCT
CGTCCGTGA
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| Protein sequence | MVPRSRGDNG SVRQTRHGAG DQHEPSFMKH RGKLYAVAYR TLGSATEAED VVQEAWLRWS
RVEPATIVDA EAFLVRVTIR LAIDQLRSAR VRREAYLGPW LPEPILTRAD IADDVVLADS
VSTALLLVLE TLSPMERAVF VLHEAFGYPY AEIAHLLGRS EPAVRQLGHR ARKAVATRRH
RYDSDPMTRQ QVTTRFLAAC SDGDLTALME ILAPSVTMVS DGGGRTGAPR KPIHGSDLVA
RAIVVLSRQQ PVGSTAVVVQ LNGGPGVLVS CAGTAVLAMT LHLVEGLVQS IQVVSNPQKL
TAVALGPTTS RAVSHIAVPP RP
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