Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3750 |
Symbol | |
ID | 5060228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4299039 |
End bp | 4299584 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640476008 |
Product | hypothetical protein |
Protein accession | YP_001160559 |
Protein GI | 145596262 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.226065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.110308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCCA TCTGTGTCTT CTGTGCGTCT TCCCGCACGC TTGACCAGCG TTTCCTGGAC CTGGCCACCG AGACCGGCGC GGAGCTGGCC CGTCGTGGTC ACACGCTCGT CAGCGGTGGT GGCCGGGTCG GGATGATGGG GGCGGTGGCG GCCGGCGTGC GGGCCGCCGG CGGGCGCACG CTGGGCATCA TCCCGCAGTC CCTGGTCGAT CTGGAGGTCG CCGACCTCGC CTCCGACGAG CTGCTGATCA CCGAGTCGAT GGCCGATCGT AAGACGATCA TGATCGACAA GTCGGATGCC TTCCTCGCCC TGCCCGGCGG CCTCGGCACG CTGGACGAGC TCTTCGAGGT CTGGACGACC GCCACGCTGA CGCTGCACAG CAAGCCGATG ACGCTGGTGG ACGCCGACGG CTTCTACCGC CCGTTGCTCG ACTGGCTGGG TGACCTTGCC GGGCAGACCT TCCTGAAACC GGCGGGGCTG GAGCTGCTCT CCGTCGTGGC GACCGTCCCC GCGGCCCTCG ACCTCCTGGA ATCCCGGTTG AGCTGA
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Protein sequence | MAAICVFCAS SRTLDQRFLD LATETGAELA RRGHTLVSGG GRVGMMGAVA AGVRAAGGRT LGIIPQSLVD LEVADLASDE LLITESMADR KTIMIDKSDA FLALPGGLGT LDELFEVWTT ATLTLHSKPM TLVDADGFYR PLLDWLGDLA GQTFLKPAGL ELLSVVATVP AALDLLESRL S
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