| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3726 |
|---|
| Symbol | |
|---|
| ID | 5060202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4268596 |
|---|
| End bp | 4269429 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640475982 |
|---|
| Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| Protein accession | YP_001160535 |
|---|
| Protein GI | 145596238 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
|---|
| TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACTTC TGCACTCGGG CAAGGTTCGG GATGTCTACG CTGACGGCGA CGACCTGATC
CTGGTCGCCT CGGACCGCGT CTCTGTCTAC GACGTCGTGC TGCCGACGCC GATCCCGGAG
AAGGGCAAGC TGCTCACGGC GCTCTCCCTG TGGTGGTTCG ACCAGCTCGC CGAGCTGGTG
CCGAACCACG TGCTCTCGGC GACCGACGTG CCGGTTGAGC TCGCCGGCCG GGCGATTCGG
TGTCGGCGAC TGGAGATGGT TCCGGTGGAG TGCGTGGCCC GGGGCTATCT GGTCGGTGGC
GGCTTCGCCG AGTACCAGCG CACCGGAGTG GTCTCCGGGA TCGAACTGCC GCGCGGAATG
GTCGAGGCGG CCGCCCTGCC GGAGCCGATC TTCACTCCCT CCACGAAGGC GCCGGTAGGA
GAGCACGACC AGCCGATGAC CTTCGGTGAG GTGGTGGACA AGGTTGGCGC GGAGACCGCC
GAGCGGCTGC GCCAGATCAC GCTCGACGTC TACCGGCGGG GAGCCGAGCT CGCCGCCGAC
CGGGGAATCC TGATCGCCGA CACCAAGATC GAGTTGGGAT GGGCCGCCGA TGGCACGCTG
ACGGTCGGCG ACGAACTGCT GACCTCGGAC TCGTCCCGGT TCTGGCCGGC CGAGTCGTAC
CAGCCGGGGC GCGCCCAGTT CTCGTATGAC AAGCAGTATG TGCGGGATTG GGCCACCAGG
AGCGGGTGGG ACAGGCGGAG CCCGGCGCCG GAGGTGCCGG ATGAGGTCGT CGACGCCACC
CGCGCCCGCT ACGTGGACGT CTACGAGAGG CTCACCGGCG AGCGCTGGGG CTGA
|
|---|
| Protein sequence | MELLHSGKVR DVYADGDDLI LVASDRVSVY DVVLPTPIPE KGKLLTALSL WWFDQLAELV
PNHVLSATDV PVELAGRAIR CRRLEMVPVE CVARGYLVGG GFAEYQRTGV VSGIELPRGM
VEAAALPEPI FTPSTKAPVG EHDQPMTFGE VVDKVGAETA ERLRQITLDV YRRGAELAAD
RGILIADTKI ELGWAADGTL TVGDELLTSD SSRFWPAESY QPGRAQFSYD KQYVRDWATR
SGWDRRSPAP EVPDEVVDAT RARYVDVYER LTGERWG
|
|---|
| |