| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3724 |
|---|
| Symbol | |
|---|
| ID | 5060200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4267163 |
|---|
| End bp | 4267654 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640475980 |
|---|
| Product | ATPase domain-containing protein |
|---|
| Protein accession | YP_001160533 |
|---|
| Protein GI | 145596236 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACG CAGACCCGGA CATCCCGCGT ACGGCTGCGC CCCCGCAACC CTGCCTTCTG
ATCGCCACGG CCTTCGACCG GAGACAGCTG ACCCAGCTGC GCCACTCGGC CTCAGCGTGC
GCGCACGCGG CGGGCCTACG GGGCCAGCGG CTCAACGACT TCGTGTTGGC GGTCAACGAG
CTGACCACCA ACGCGGTTCG CCACGGTGGC GGCCGTGGTT CGCTGCGGAT GTGGCGGCAG
GCCGAGAGCC TGGTCTGCGA GGTCTCCGAC CAGGGGGATG GGATCAGCAG CCGACCACTC
GGAGACCACC GCCGCCCGGC CCCGGAGACG GTCGGTGGTT GGGGGCTCTG GCTGGTTCGC
GAGCTGAGCG ACACCATGGA CGTGACGTCC GACCGAGGCG GCACGGTCGT CCGCATCACG
ACCATCCTGC CGGTCCCACA CCCGCCCACG ACCAGCCAGG GGCGGGATGG GTTCAGCCGA
AGAGCGCGCT GA
|
|---|
| Protein sequence | MTNADPDIPR TAAPPQPCLL IATAFDRRQL TQLRHSASAC AHAAGLRGQR LNDFVLAVNE
LTTNAVRHGG GRGSLRMWRQ AESLVCEVSD QGDGISSRPL GDHRRPAPET VGGWGLWLVR
ELSDTMDVTS DRGGTVVRIT TILPVPHPPT TSQGRDGFSR RAR
|
|---|
| |