| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3686 |
|---|
| Symbol | |
|---|
| ID | 5060162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4227140 |
|---|
| End bp | 4227841 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640475942 |
|---|
| Product | response regulator receiver |
|---|
| Protein accession | YP_001160495 |
|---|
| Protein GI | 145596198 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCTA CCCAGACCGA GGCTCGACTG CTCGTCGTCG AGGACGACCC GAACATTCTC
GAGCTGCTCT CCGCGAGCCT GCGCTTCGCC GGTTTCGACG TGGCGACCGC GATCAGCGGC
AGCGCCGCGC TGAGCGCGGC GAAGGAGCAC CGCCCCGATC TGGTCGTATT GGACATCATG
CTGCCCGACC TGGACGGGTT TGAGGTCATC CGGCTGCTGC GCGAGGGGGG CACCCGTACC
CCGGTCGTCT TCCTGACCGC GCGGGACGCC ACCGACGACA AGATCCGTGG ACTGACCCTG
GGCGGGGACG ACTACGTGAC CAAGCCGTTC AGTCTGGAGG AGCTGACCGC CCGGATCCGG
GCGGTGCTGC GCCGCAGCAC CAGCGGTGAG CAGGCCCCGG CCCGACTCAC CTTCGCCGAC
CTCGAACTCG ACGAGGAGGC GCACGAGGTG CACCGGGCGG GGCAGCGGGT GCAGCTCTCC
CCGACCGAGT TCAAGCTGCT GCGGTACCTG ATGCTGAACG CCAATCGAGT GCTCTCCAAG
GCGCAGATCC TCGATCACGT CTGGAACTAC GACTTCCGGG GCGACGACAA CATCGTCGAG
TCGTACATCT CGTATCTTCG GCGTAAGGTC GACAACACCC AGCCTCGGTT GATCCACACC
CTTCGTGGAG TCGGGTACGT GCTCCGCAAG CCGGCAGCGT GA
|
|---|
| Protein sequence | MAATQTEARL LVVEDDPNIL ELLSASLRFA GFDVATAISG SAALSAAKEH RPDLVVLDIM
LPDLDGFEVI RLLREGGTRT PVVFLTARDA TDDKIRGLTL GGDDYVTKPF SLEELTARIR
AVLRRSTSGE QAPARLTFAD LELDEEAHEV HRAGQRVQLS PTEFKLLRYL MLNANRVLSK
AQILDHVWNY DFRGDDNIVE SYISYLRRKV DNTQPRLIHT LRGVGYVLRK PAA
|
|---|
| |