Gene Strop_3681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3681 
Symbol 
ID5060157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4220615 
End bp4221631 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content69% 
IMG OID640475937 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001160490 
Protein GI145596193 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCAC CACCCCGGTG GCTGCGCCGG CTGCTCCTGG CGCCGGGTGT GGTCGTGCTG 
GCGGTCACCG TGGTGATGAC GGTGCCGGTA TGGGCCCTGC TCGCCCTGGC CGCCTCGCCG
TTTGTACCAG GTCGGCTGCG TCCACTACGG CTGCTCTGGA TCGGTCTCGT CTATCTGGTG
TGGGACGCGG CAGCGCTGAT CGTGCTCTTC GTGCTCTGGG TCGCCTCCGG GTTCGGCTGG
CGGGTCCGGT CCCCGGCGTT CGAACAGGCT CACTACCGGC TCGCCGGCTG GTTCCTGCGG
GTGCTGTTCT GGCAGGCCCG GTGGAGCCTG CGACTCTCCA TCGAGGTGGC CGGCGCCGAT
CCGGACACGG CCCTGGCCGG ACGGCCGGAG CTGGTGTTGT GTCGGCACGC CGGCCCGGGT
GACTCGTTCA TCCTGATCCA TGCCCTGGTC AACTGGTTCC GTCGGGAGCC GCGGATCGTG
CTCAAGAACA CCCTGCAGTG GGATCCGGCG GTTGACGTGC TGCTCAACCG CCTACCGAAC
CGCTTTCTCG CGCCCGGCCC GGACGGCCGC GCGACGTTGA CCGAGCAGAT CGGGCAGCTC
GCCGCTGGCT TGGACGATGA CGATGCCTTC GTGCTCTTTC CCGAGGGCGG TAACTTCACG
CCGAAGCGTC GCGTGCGGGC GATCGCTCGG CTGCGGGAAC TGGGCCACGA GTTGATGGCG
TCACGGGCGG AACGGATGCG CCACGTGCTT GCCCCGCAGC CGGGCGGGCT GCTGGCCGCG
CTGGACGCCG CCCCCGACGT CGGCGTCATC TTCGTCGCCC ACACCGGTCT GGACCGGATG
GTGACCGTTG CCGACGTGTG GCGGGAGCTC CCCATGGACA AGCGGATCGT GATGCGCTTC
TGGTCTGTGC CCCCGGAGGA GGTGCCGGTC GGTGCGCAGG AGCGCATCGA TTGGCTCTTC
GACTGGTGGG GGCGGATGGA CGAGTGGATC GCCAAGAACC AGGACGGGCC CACATAG
 
Protein sequence
MPPPPRWLRR LLLAPGVVVL AVTVVMTVPV WALLALAASP FVPGRLRPLR LLWIGLVYLV 
WDAAALIVLF VLWVASGFGW RVRSPAFEQA HYRLAGWFLR VLFWQARWSL RLSIEVAGAD
PDTALAGRPE LVLCRHAGPG DSFILIHALV NWFRREPRIV LKNTLQWDPA VDVLLNRLPN
RFLAPGPDGR ATLTEQIGQL AAGLDDDDAF VLFPEGGNFT PKRRVRAIAR LRELGHELMA
SRAERMRHVL APQPGGLLAA LDAAPDVGVI FVAHTGLDRM VTVADVWREL PMDKRIVMRF
WSVPPEEVPV GAQERIDWLF DWWGRMDEWI AKNQDGPT