| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3673 |
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| Symbol | |
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| ID | 5060149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4211654 |
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| End bp | 4212511 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640475929 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001160482 |
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| Protein GI | 145596185 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.86149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCTGCTC CCTCCCGTCG GTGGCGTAGC TTCCTCGCCG GGCGTCAAGT CGACTCGGGT
GGGTTAGGCT CCTCCGATCG ATCGAGGTTA CTGGGAGGTA GCATGTCGGA GCAGCGGGTC
GCGATCGTGA CCGGCGCGGC ACGGGGCATC GGGGCGGCCA CCGCCCGGCG GCTGGCCGCC
GACGGGTTGG CCGTCGCCGT GGTGGACATC GACGAGTCCG CGACCGGTGA TACCGTCGCG
GCCATCGCCG CCGCGGGTGG GCGGGCGCTT GGCGTCGGCG CGGACGTGTC GGACCGGGCC
CAGGTGGAGG CAGCCGTCGA GCGGGTCGCC GCCGATCTCG GCGCGCCCAC CGTTCTGGTG
AACAATGCCG GTGTTCTGCG GGACAACCTG CTGTTCAAGA TGTCCGATGC CGACTGGGAA
ACCGTGCTGG GCGTGCACCT GCGGGGTGCC TTCCTGTTCA GCCAGGCCAC CCAGCAGCAC
ATGGTCGAGC AGCGGTGGGG CCGGATCGTC AACCTCTCCA GCATCTCCGC ACTCGGCAAC
CGGGGCCAGG CGAACTACGC CACCGCCAAG GCCGGACTGC AGGGCTTCAC GAAGACCCTC
GCGATCGAGT TGGGCCCGTT CGGGGTGACG GTCAACGCGG TCGCTCCGGG TTTCATCGTC
ACCGACATGA CCGCGGCGAC CGCCGCCCGA ATGAAGATTG ACTTCGAGAC GCTACAGAAA
CACGCTGAGG CGGAGATTCC AGTCCGCCGG GTGGGCCGTC CGGAGGACAT CGCCCACACC
ATCTCGTTCC TGGCCAGTGC GGGCGCGTCG TTCGTCTCCG GGCAGGTCAT CTACGTCGCC
GGCGGGCCGA AGGACTGA
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| Protein sequence | MPAPSRRWRS FLAGRQVDSG GLGSSDRSRL LGGSMSEQRV AIVTGAARGI GAATARRLAA
DGLAVAVVDI DESATGDTVA AIAAAGGRAL GVGADVSDRA QVEAAVERVA ADLGAPTVLV
NNAGVLRDNL LFKMSDADWE TVLGVHLRGA FLFSQATQQH MVEQRWGRIV NLSSISALGN
RGQANYATAK AGLQGFTKTL AIELGPFGVT VNAVAPGFIV TDMTAATAAR MKIDFETLQK
HAEAEIPVRR VGRPEDIAHT ISFLASAGAS FVSGQVIYVA GGPKD
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