Gene Strop_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3650 
Symbol 
ID5060125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4182170 
End bp4183219 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content68% 
IMG OID640475905 
Productthreonine synthase 
Protein accessionYP_001160459 
Protein GI145596162 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGCGGG GTCTAATCGA CGCGTACCGA GATCGGTTGC CGGTCACCGC GACCACCCCG 
GTCGTCACCC TGCACGAGGG GAACACCCCG CTGTTGCCGG CACCGGTGCT GTCGGGGCGA
ACCGGGTGCG AGGTCTATCT GAAGGTCGAG GGTGCCAACC CGACCGGCTC CTTCAAGGAC
CGGGGGATGA CCGTGGCGGT CTCCAAAGCG GTCGAGGCAG ACAACAAAGT GATCATCTGT
GCCTCGACCG GCAACACCAG CGCCTCGGCG GCGGCCTACG CGGCGCGAGC TGGCCTGACC
TGTGCGGTGC TGGTGCCGCA GGGCAAGATC GCGCTGGGCA AGCTCGCCCA AGCATTGGTG
CATGGTGCCC GACTGCTCCA GGTCAGCGGT AACTTCGACG ACTGCCTGTC GTTGGCCGCG
AAACTCGCCC AGGACTATCC GGTCGCCCTG GTGAACTCGG TGAACATTGA TCGCCTACAC
GGCCAGAAAA CCGCCGCGTT CGAGATCGTC GAGGCGCTTG GTGCCGCGCC GGACATCCAC
TGCATGCCGG TCGGCAATGC GGGGAACATC TCCGCCTACT GGCTCGGCTA CTCGGAGGAA
CGGGCGGCCG GAAACATCCC CCAGACCCCG AAGCTCTACG GTTTCCAGGC CGCTGGCGCC
GCGCCGATCG TCACCGGCCA GGCGGTGCGT GAACCGGCCA CGATCGCCAC CGCAATCCGG
ATCGGCAATC CGGCGAGCTG GACGAGAGCG CTGGATGCCC GGGACGCCTC TGGCGGTCTG
ATCGCCGCGG TTACCGACCG GGAGATCCTG TCCGCGTACC GGCTGCTCGC TCGCGATGTC
GGGGTCTTCG TCGAGTTGGG TAGCGCTGCG AGTGTCGCGG GACTGCTCCA GCAGGCCGCC
GCGGGCGCGG TGCCGCGGGG TTCGACGGTT GTCTGCACGG TCACCGGTCA CGGCCTGAAA
GACCCGGAGT GGGCGATCTC TACCGCCCCC GCGCCGGTGA CCATCGCCAA TGACCCCCTG
GCCGCGGCCC GTTCGCTCGA CCTGGCCTGA
 
Protein sequence
MWRGLIDAYR DRLPVTATTP VVTLHEGNTP LLPAPVLSGR TGCEVYLKVE GANPTGSFKD 
RGMTVAVSKA VEADNKVIIC ASTGNTSASA AAYAARAGLT CAVLVPQGKI ALGKLAQALV
HGARLLQVSG NFDDCLSLAA KLAQDYPVAL VNSVNIDRLH GQKTAAFEIV EALGAAPDIH
CMPVGNAGNI SAYWLGYSEE RAAGNIPQTP KLYGFQAAGA APIVTGQAVR EPATIATAIR
IGNPASWTRA LDARDASGGL IAAVTDREIL SAYRLLARDV GVFVELGSAA SVAGLLQQAA
AGAVPRGSTV VCTVTGHGLK DPEWAISTAP APVTIANDPL AAARSLDLA