| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3629 |
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| Symbol | |
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| ID | 5060104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4156930 |
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| End bp | 4158066 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640475884 |
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| Product | transcription attenuator LytR |
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| Protein accession | YP_001160438 |
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| Protein GI | 145596141 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.142384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTAAGG CCGGCAAAGG CGGCAAGAAG AAGCCGTCGG TGTGGGCGGG CGTGCCGCGG
TGGGCCCAGG TGTGCACCGT CTTCGGCGCC GTCTTGATGT TTGTCAGCGG CGCTGCCCTG
GTCGGGGTTG AGGCGCTGTT TGCCCGGTAC GAGGGCGCGG TGGGCAAGGC GGACCTGTTC
GGTGATCAGG CGGCGGGAGC CAGCGAGCGC ACGAGCGACA TCAAGGGCCC GCTCAACATC
CTGCTCGTCG GCATTGACCC CCGTAAGGAG GAACAGCCGC CGCTGGCCGA CTCGATCATG
GTGCTGCACG TGCCGGAAGG GCTCGACCGG GCGTTCCTCT TCTCGATGCC CCGGGATCTC
TACGTCGACA TTCCCGCCTT CGACAAGGCC GGGTACCCGG GTGGCCGGGG CAAGCTCAAC
GCCGCGATGG CCCACGGCAG CCGCGTGCAG GGGGAGAACC CCAGCGTGGC GCAGGGCTTC
GAACTGCTCG GCAAGACGGT CCAGTCGGTC ACGGGGATCC CACGCTTCGA CGCCGGGGCG
ATCATCAACT TCGGTGGTTT CGTCAAGATC GTTGATGCGA TGGGTGGCGT CACGATGGAC
ATCGAGCGCG AGGTGCGATC GCGGCATCGT CAACCCGACG GCACGCACCG TGAGCTGCGG
GCCGGCGGCG GGGGGTACGT CGGCGAGCAG GCGGTATACC CAAAGGGGGA GCAGCTCCTC
GAGGGATGGC AGGCGCTGGA CTATGTCCGT CAGCGTTATG AAGAGAACGG TGTGCCAGAC
GGCGACTACG GCCGCCAGCG TCACCAGCAG CAGTTCGTCA AGGCAATGGC GACTCAGGCC
ATCAGCGCCG ATGTGGTGAG CAACCCGCTC AAGCTGGACC GGGTGCTCCG GGCCGCCGGT
GAGTCGCTGG TCTTCAACGG CCGGGGGCAC AGCGTGGTTG ACTTTGGCCT CGCGTTGAAG
GATCTCCGGC CGGCGAGCAT TCAGATGATC AAATTGCCGG GTGGTGAAGT CAAGGATGGC
GGGACGTACC TGGGCGAGCG CTTCAAGTCG GCTGTTTGGG ACTTCTTCCA GGCGTTGCGG
GACGAGCAGC TCGACGCGTT CCTGCTGGAG CATCCGGACT TCCAGAACAA GATCTGA
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| Protein sequence | MGKAGKGGKK KPSVWAGVPR WAQVCTVFGA VLMFVSGAAL VGVEALFARY EGAVGKADLF
GDQAAGASER TSDIKGPLNI LLVGIDPRKE EQPPLADSIM VLHVPEGLDR AFLFSMPRDL
YVDIPAFDKA GYPGGRGKLN AAMAHGSRVQ GENPSVAQGF ELLGKTVQSV TGIPRFDAGA
IINFGGFVKI VDAMGGVTMD IEREVRSRHR QPDGTHRELR AGGGGYVGEQ AVYPKGEQLL
EGWQALDYVR QRYEENGVPD GDYGRQRHQQ QFVKAMATQA ISADVVSNPL KLDRVLRAAG
ESLVFNGRGH SVVDFGLALK DLRPASIQMI KLPGGEVKDG GTYLGERFKS AVWDFFQALR
DEQLDAFLLE HPDFQNKI
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