Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3607 |
Symbol | |
ID | 5060082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4130390 |
End bp | 4131292 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640475862 |
Product | thioredoxin domain-containing protein |
Protein accession | YP_001160416 |
Protein GI | 145596119 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.150797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC CACGGATCAC CCCGTCGATC TTTACCCGCG GCGCGGTAGA CCTCAGCGCG CTGCGCACCC CCGCACCCTC CCCGGCCCCC GCGCCTGCCC AGTCCGGCCC GTCCGATGAC GGCGTCGGGA GCACTGCCGC CGTCATCGAT GTTTCCGAGG CAACCTTCCA GGCAGAGGTC CTTGAACGGT CGCTCAGTAC ACCGGTGGTC GTCGATTTCT GGGCCGAGTG GTGCGAGCCC TGTAAGCAGC TCTCGCCGGT ACTCGAGCGG CTCGCCGTCG AGGGCGCCGG CGCCTGGGTG CTGGCCAAGG TCGACGTGGA CGCCAACCCC CGGCTGGCGC AGATGTTCCG GGTACAGGGC ATCCCGATGG TCTACGCGGT GGTCGGCGGC CAGCCGGTTG ACGCGTTCTC CGGAGTGGTG CCCGAGGCGC AGCTACGGCA GTGGATCCAG GCGGTTCTCA AGGCTGGTGG CGCGACTGTG GCCGAGACGG CCGATCCACG GTTGGACGAG GCCGACGAGT CGCTGCTCAA CGGCGACCTG GACACCGCGG AGCAGGCGTA CCGCAAGATT CTGGCCGAGA CGCCCTCGGA CGCCGCGGCG GAGGCAGGCC TGGCCCAGGT CGGGCTTGCC CGTCGGGTCG CCGGTGCTGA CCCGCAGGCG GTGCTCACCG CGGCGGCCGC GGCAACCGAC GACGTCGACG CCCAGCTGCT CGCCGCCGAT GTCGAGGTGC TCGGCGGGAT GGCGGAACAG GCCTACCAAC GTCTGGTCGG GCTGGTTCGC CGTACCGCCG GCGAGGACCG CGAGAAGGTA CGTCAGCACC TCGTCGGCCT CTTCACCATC GCCGGTCCCG ACGATTCCGC GGTGGCGCTG GCCCGTCGGG CACTGGCCAG CGCCCTGTTC TGA
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Protein sequence | MSDPRITPSI FTRGAVDLSA LRTPAPSPAP APAQSGPSDD GVGSTAAVID VSEATFQAEV LERSLSTPVV VDFWAEWCEP CKQLSPVLER LAVEGAGAWV LAKVDVDANP RLAQMFRVQG IPMVYAVVGG QPVDAFSGVV PEAQLRQWIQ AVLKAGGATV AETADPRLDE ADESLLNGDL DTAEQAYRKI LAETPSDAAA EAGLAQVGLA RRVAGADPQA VLTAAAAATD DVDAQLLAAD VEVLGGMAEQ AYQRLVGLVR RTAGEDREKV RQHLVGLFTI AGPDDSAVAL ARRALASALF
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