Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3561 |
Symbol | |
ID | 5060036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4080944 |
End bp | 4081486 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640475816 |
Product | deaminase-reductase domain-containing protein |
Protein accession | YP_001160370 |
Protein GI | 145596073 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAGC TCGTGCTCTA CACGCTGATG TCGATGGACG GGGTGGTGGA GTCACCCGAC CGCTACATTT TCGACTTCGA CGAGGTGATG TACGCCAACC TCGCCCGGAC GATCAAGAGT CAGGACACCG TGCTGCTCGG CCGACGGACC TACGACGAAT GGGCGCCGTA CTGGCCGACG GCGGAGGAGC AGCCCTTCGC CGACTTCATC AACGAGGTGC CGAAGTTCCT GCTCAGCTCG GCGACTCCGA CAGTGCCGTG GGCCAACACC ACGGTCGTCT CAAGTCCGGT CGCCGATCTC GTTCGCAGGC TCAAGGAGCG TCCGGGTGGC GACATCGGCG TCCACGGCAG TATTCGCCTC GCCCAGTCAC TACTGGCGGA CAATCTGGTC GACGAACTCC GGCTCGTCAT CGCCCCGGCG GTACTGGGCT CCGGGCGGCG ACTGCTCGGT GAGGGTGACG AGCAGCTACG GCAGTGGAAT CTGCTGCGGC TTGAGGGAAC CCCCTCCGGC GCCGTGCTGG CCGACTATCA ACTCGCCCGC TGA
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Protein sequence | MRKLVLYTLM SMDGVVESPD RYIFDFDEVM YANLARTIKS QDTVLLGRRT YDEWAPYWPT AEEQPFADFI NEVPKFLLSS ATPTVPWANT TVVSSPVADL VRRLKERPGG DIGVHGSIRL AQSLLADNLV DELRLVIAPA VLGSGRRLLG EGDEQLRQWN LLRLEGTPSG AVLADYQLAR
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