Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3546 |
Symbol | |
ID | 5060020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 4065085 |
End bp | 4066179 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640475800 |
Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
Protein accession | YP_001160355 |
Protein GI | 145596058 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCTGG AGAGGACGAC AGCGGCGATC GGACCGCTCG ACGAGCAGGC GATGGCTACC GCCGCAGACC TGCAGAGTCG GCTGACCAAA CCCGCGGGCT CCCTCGGTGT GCTGGAAGAG CTCTCCGTTC GTCTCGCCGG CCTGGCCGGC GTCTGCCCGC CGCCGCTGCC CGAGCCGGCC GCGGTGGCCG TCTTCGCCGG AGACCATGGT GTGCACGCCC AGGGCGTGAC GCCCTGGCCG CAGGAGGTCA CCGGTCAGAT GATCGGCAAC TTCCTCGCCG GCGGGGCGGT GGTCAACGCG TTCGCCCGGC AGACCGGGGC CACGGTGACC GTCGTGGACG TCGGGGTCGC CGCACCGCCA ACGTCCATCG AGACCGCGCC GCCCGAGTCG GCCACGGCCA GCGGTGCCAG ACCCCGGCTG GTCGAGGCGA ACATCCGACG CGGCACCCGG GATCTGACCG TCACCGCCGC CCTCACCCGG GACGAGGCCC GGGCCGCGGT GGAGACAGGT ATTCGGGTCG CCGACGAACT CGTCGATGCC GGGGCCGCCA TCCTGCTCAC CGGGGATATG GGTATCGGCA ACACCACACC GGCCGCCGCG CTGATCGCGG TCTTCGCCGA GGCTGACCCC GCCACGGTGA CCGGCCGGGG CACCGGAGTG GACGATCCGA CACACCAGCG CAAGATCGAG GTGGTCCGGG CGGCGCTGCG CCGGCACGAG CCGGACCCGG CGGACCCGCT GGGCGTGCTG GCGGCCGTCG GTGGCCTGGA GCACGCGGCC CTGGCCGGGC TGATCCTGGG CGCCGCCGCC CAACGGGTGC CGGTGCTGCT CGACGGCGTC ATCGCCGACT CGGCTGCGCT GGCCGCCGCG GCATTCGCCC CGTCTGCCAC CGGCGCGATG GTGGCAGGCC ACCGGTCGGT CGAGCCGGGA GCCACGGTGG CGCTGCGCCG ACTGGGGTTG ACCCCTCTGG TCGACCTTGG GTTGCGCCTC GGTGAGGGCA CCGGGGCGCT GCTGGCCCTG CCGGTGGTCG CGGGGGCCGT CCGAGTGCTG CACGAGGTCG CCACCTTCGA CTCGGCAGGG GTGGCGCAGA AGTGA
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Protein sequence | MMLERTTAAI GPLDEQAMAT AADLQSRLTK PAGSLGVLEE LSVRLAGLAG VCPPPLPEPA AVAVFAGDHG VHAQGVTPWP QEVTGQMIGN FLAGGAVVNA FARQTGATVT VVDVGVAAPP TSIETAPPES ATASGARPRL VEANIRRGTR DLTVTAALTR DEARAAVETG IRVADELVDA GAAILLTGDM GIGNTTPAAA LIAVFAEADP ATVTGRGTGV DDPTHQRKIE VVRAALRRHE PDPADPLGVL AAVGGLEHAA LAGLILGAAA QRVPVLLDGV IADSAALAAA AFAPSATGAM VAGHRSVEPG ATVALRRLGL TPLVDLGLRL GEGTGALLAL PVVAGAVRVL HEVATFDSAG VAQK
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