| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3531 |
|---|
| Symbol | |
|---|
| ID | 5060005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4048830 |
|---|
| End bp | 4049726 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640475785 |
|---|
| Product | tryptophan 2,3-dioxygenase |
|---|
| Protein accession | YP_001160340 |
|---|
| Protein GI | 145596043 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
|---|
| TIGRFAM ID | [TIGR03036] tryptophan 2,3-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACGAA CAGAACTACG GGCGACCACC GCGGCGGAGG TGCGGCCGGC AACCCCGCGG
CAACGCGCTA CCCGAGCCGC CCGCAACGGC GGTGAGCCCA CCCTGGAGTT CACTGGACGG
ATCCCGTACG ACGCCTACGT CCAGGCCAGC ACCCTGCACC GATTGCAGAC GCCGCTGAGC
AGCGACCCGG GCGAGATGTC CTTCCTCGTG ACCAGTCAGA TCATGGAGCT GTACTTCAAT
CTGATCTGTC ACGAACTGCG CGAGATCCAG CGGCTGCTAC GCGCGGACCA GATTCGGGAT
GCCCTGGCCC CGCTGCGTCG CGCCGCCCTG CACCTGGACG GGCTGAACGC GGCCTGGCGG
AGCCTGCGCT GGATGACTCC CGCCGACTTC AACCGGTTCC GCAATCTCCT CGGCGAGGGC
TCGGGCTTCC AGTCGGCGAT GTATCGCCAC CTGGAACTCC TGCTGGGTCT CCGCGACCCC
GCCCTGATCC GTCCGTTCCG TCGGCAGGTC GAGGTGCACG CCGAACTGAC CGCTGCCCTG
AACGCTCCCA GCCTCTGGGA CGACGTGCTC GCTCTGCTCG CCCGGCACGG CCATGATCTT
CCTCAGGAGC TTCTCGGCCG CGACGTCGCC GAGGAGCACC AGCCGCATCC GGCGGTGGAG
GCCGCCTGGG TGCGAATCTA CACCGCCAGC CCGGATGACC AGCTTCGGCT GCTCGGCGAG
GCGTTGACCG AGGTGGCCGA GGGGTTCGGC GACTGGCGCT GGTACCACGT CAAGGCGGTG
CAGCGGACGA TGGGCGCCAA GGTCGGTAGC GGTGGCTCGG CTGGACTGGC CTGGCTACAA
CGGAGCATGG CCCGGGTGGT CTTCCCGGAG CTGTGGTCGG CCCGGACCGC GATGTGA
|
|---|
| Protein sequence | MERTELRATT AAEVRPATPR QRATRAARNG GEPTLEFTGR IPYDAYVQAS TLHRLQTPLS
SDPGEMSFLV TSQIMELYFN LICHELREIQ RLLRADQIRD ALAPLRRAAL HLDGLNAAWR
SLRWMTPADF NRFRNLLGEG SGFQSAMYRH LELLLGLRDP ALIRPFRRQV EVHAELTAAL
NAPSLWDDVL ALLARHGHDL PQELLGRDVA EEHQPHPAVE AAWVRIYTAS PDDQLRLLGE
ALTEVAEGFG DWRWYHVKAV QRTMGAKVGS GGSAGLAWLQ RSMARVVFPE LWSARTAM
|
|---|
| |