Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3453 |
Symbol | |
ID | 5059922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3959700 |
End bp | 3960842 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640475702 |
Product | PhoH family protein |
Protein accession | YP_001160262 |
Protein GI | 145595965 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.127019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGCAA CGCCCAGCAC GCCGCGGCGA CCGGCCCGGC GCCGAGATCG AGAGCAGGTG GCTCAGGGTC ACTCGACCCA ACCTATGACC AGCACCCCAC CGCCCGGCCC GCCCCGGGTG CAGACCAGGA TTACCGTCCC GGAACCGAAG ATCATGGTGA ATCTCCTCGG TGCGGGGGAC GAGATCCTGC GACTGGTCGA GCGCTCCGTG AACAGTGATG TGCATGTTCG GGGTAACGAG ATCACGATCA CCGGCGCACC CGCGGACAAC GCTCTCGCCG AGCGGCTCTT CGGCGAACTG ATCGAACTCA TCGAGAAAGG TGAGACGCTG ACCACCGACG CCGTCCGGCG CACCGTTGGC ATGCTCGAGC AGGGCAGCGC CGAGCGGCCC GCCGATGTCC TGACGCTCAA CATCCTCTCC CGGCGTGGTC GCACCATCCG CCCCAAGACG CTCGGGCAGA AGCGTTACGT CGACGCGATC GACGCGCACA CCATCGTCTT CGGCATCGGC CCGGCTGGCA CCGGCAAGAC CTACCTGGCG ATGGCGAAGG CGGTCCAGAC GCTGCAGGCC AAGCAGGTCA ACCGGATCAT CCTCACCCGG CCGGCGGTCG AGGCGGGCGA GCGGCTGGGC TTCCTGCCCG GCACGCTGAA CGAGAAGATC GACCCGTATC TGCGACCGTT GTACGACGCG CTGCACGACA TGCTCGACCC GGAGTCGATT CCGAAGCTGA TGGCGGCGGG CACGATCGAG GTGGCGCCGC TGGCGTACAT GCGGGGTCGG ACGCTCAACG ACGCGTTCAT CATCCTGGAC GAGGCGCAGA ACACCACGCC CGAGCAGATG AAGATGTTTC TCACCCGGCT CGGCTTCGGT TCCAGGATCG TTGTCACCGG CGACGTCACC CAGGTGGACC TCCCCGGCGG AACGACCAGC GGCCTGCGGG TCGTCCGGGA GATCCTCACC GATGTGGCGG ACGTGCACTT CGCCCAGCTC TCCAGCTCGG ACGTGGTCCG GCACCGGCTG GTCGGGGAGA TCGTTGACGC GTACGCCCGC TGGGACGTGG AGCGGGAAAA TCAGCAGGCG AAGAGCGTGC CGGCGGTGCC CGGGCGGCCC ACCCAGGGCG GCCGCGCCGG CCGGCGTCGC TAA
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Protein sequence | MGATPSTPRR PARRRDREQV AQGHSTQPMT STPPPGPPRV QTRITVPEPK IMVNLLGAGD EILRLVERSV NSDVHVRGNE ITITGAPADN ALAERLFGEL IELIEKGETL TTDAVRRTVG MLEQGSAERP ADVLTLNILS RRGRTIRPKT LGQKRYVDAI DAHTIVFGIG PAGTGKTYLA MAKAVQTLQA KQVNRIILTR PAVEAGERLG FLPGTLNEKI DPYLRPLYDA LHDMLDPESI PKLMAAGTIE VAPLAYMRGR TLNDAFIILD EAQNTTPEQM KMFLTRLGFG SRIVVTGDVT QVDLPGGTTS GLRVVREILT DVADVHFAQL SSSDVVRHRL VGEIVDAYAR WDVERENQQA KSVPAVPGRP TQGGRAGRRR
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