Gene Strop_3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3448 
Symbol 
ID5059917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3955231 
End bp3956493 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content67% 
IMG OID640475697 
Productacyltransferase 3 
Protein accessionYP_001160257 
Protein GI145595960 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.022428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAAAT TCACTTTTTC CTCTGGCGGG CTCGCGCTTT TCAGGTCACC AGCGGAAGGT 
AGGGGACTGT GTTTCCCTCC CCTCACCGGA AATAGTAGCA AGCTGATGCG AAATCGTTAC
CTAGACCTGC TGCGTGCCCT CGCTGTCGTA CGGGTCGTGG TCTACCACGT AACCGGGTGG
GCCGCCATGA CGCTGGTCTT TCCCGCGATG TCGGTGATGT TCGCGCTGGC CGGATCGCTG
ATGGCGGCGT CCCTGCATCG GTTTGGGACG GCGGCGGTCG GTCGTCGGCT GCGGCGGTTG
CTGCCGTCGC TCTGGATGCT CGCCGCGATC TTCGTGCCGG CCATGCTGCT CACCGGGCTG
CCGCTCACTC CCAAGGTCCT GCTCTGGCTC TTCCCGGTGT CCGACCCACC GGCAAACCAC
TGGGGCGCTC TGGCGTTGAG CCCGATCTGG TACCTGCGCA ACTACCTCTG GTTTGTGCTT
GTCTCGCCGC TGGCGTGGTG GTTGTTCCGC CGGGCCCCGC TGCCCACCCT GCTTGTCCCG
TACGCGCTGA CCGCAGCGAT CGAACTGGGG CTGTACCCGA ATCCACCGAT GGTGGTGCAG
CAGTTCGGCC TGTACCTCGG GGCGTGGATG TTGGGCTTCG CCCACCAGGA GGGGATGCTG
CGCCGGCTCG CCAATCGAGT CCTGTGGCCG ACCGCGATCG CCCTGGTCGC CCTCGGCGGC
TGGTGGAACC TGACCCAGCC CGGGACAAAG GGGCTCGACC TCAACGGCAA TCCGCTCGCC
AACGCCCTCT GGTCGGCCGG TGTCATTCTG GTCGTGCTCG GGCGGGAGCC GGCCAAAACG
GCGTGGATCG ACCGCAACGC GCTCGTCAGT CGGTTGGTCA CTCTGATCAA CCGGCGCGCA
CTCACCGTGT ACCTGTGGCA CATGGCCTTC GTGGTCGCGC TCACCCCGCT GGTGGACGTG
GTCGGTTGGT CGCACCAGAA TCTACTCGGC CTGGCTATCC GGGTTGTGCT GGTCTTCGCC
CTGCTCGGGG TCGTCATCAT GCTCGTCGGC TGGGTTGAGG ACATCGCGGC TCGGCGTCGG
CCCGAGTTGA TCCCCGGTTT CGGGCGAAGA GCGGCATCCG CGCCCGAGGC GGCAGCGGAG
CAACCCGCGT CCGGTTCGGC GGGGCAGGTC GGGACGGTGC GCAAGCAGCC GGTGGTGCCG
ACGCCCCGGT CGGCGGAGAA CGAGCGCGTG CAGGCTGGGA GCGTGGACAG CAACGCGCGG
TGA
 
Protein sequence
MRKFTFSSGG LALFRSPAEG RGLCFPPLTG NSSKLMRNRY LDLLRALAVV RVVVYHVTGW 
AAMTLVFPAM SVMFALAGSL MAASLHRFGT AAVGRRLRRL LPSLWMLAAI FVPAMLLTGL
PLTPKVLLWL FPVSDPPANH WGALALSPIW YLRNYLWFVL VSPLAWWLFR RAPLPTLLVP
YALTAAIELG LYPNPPMVVQ QFGLYLGAWM LGFAHQEGML RRLANRVLWP TAIALVALGG
WWNLTQPGTK GLDLNGNPLA NALWSAGVIL VVLGREPAKT AWIDRNALVS RLVTLINRRA
LTVYLWHMAF VVALTPLVDV VGWSHQNLLG LAIRVVLVFA LLGVVIMLVG WVEDIAARRR
PELIPGFGRR AASAPEAAAE QPASGSAGQV GTVRKQPVVP TPRSAENERV QAGSVDSNAR