Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3448 |
Symbol | |
ID | 5059917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3955231 |
End bp | 3956493 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640475697 |
Product | acyltransferase 3 |
Protein accession | YP_001160257 |
Protein GI | 145595960 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.022428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAAAT TCACTTTTTC CTCTGGCGGG CTCGCGCTTT TCAGGTCACC AGCGGAAGGT AGGGGACTGT GTTTCCCTCC CCTCACCGGA AATAGTAGCA AGCTGATGCG AAATCGTTAC CTAGACCTGC TGCGTGCCCT CGCTGTCGTA CGGGTCGTGG TCTACCACGT AACCGGGTGG GCCGCCATGA CGCTGGTCTT TCCCGCGATG TCGGTGATGT TCGCGCTGGC CGGATCGCTG ATGGCGGCGT CCCTGCATCG GTTTGGGACG GCGGCGGTCG GTCGTCGGCT GCGGCGGTTG CTGCCGTCGC TCTGGATGCT CGCCGCGATC TTCGTGCCGG CCATGCTGCT CACCGGGCTG CCGCTCACTC CCAAGGTCCT GCTCTGGCTC TTCCCGGTGT CCGACCCACC GGCAAACCAC TGGGGCGCTC TGGCGTTGAG CCCGATCTGG TACCTGCGCA ACTACCTCTG GTTTGTGCTT GTCTCGCCGC TGGCGTGGTG GTTGTTCCGC CGGGCCCCGC TGCCCACCCT GCTTGTCCCG TACGCGCTGA CCGCAGCGAT CGAACTGGGG CTGTACCCGA ATCCACCGAT GGTGGTGCAG CAGTTCGGCC TGTACCTCGG GGCGTGGATG TTGGGCTTCG CCCACCAGGA GGGGATGCTG CGCCGGCTCG CCAATCGAGT CCTGTGGCCG ACCGCGATCG CCCTGGTCGC CCTCGGCGGC TGGTGGAACC TGACCCAGCC CGGGACAAAG GGGCTCGACC TCAACGGCAA TCCGCTCGCC AACGCCCTCT GGTCGGCCGG TGTCATTCTG GTCGTGCTCG GGCGGGAGCC GGCCAAAACG GCGTGGATCG ACCGCAACGC GCTCGTCAGT CGGTTGGTCA CTCTGATCAA CCGGCGCGCA CTCACCGTGT ACCTGTGGCA CATGGCCTTC GTGGTCGCGC TCACCCCGCT GGTGGACGTG GTCGGTTGGT CGCACCAGAA TCTACTCGGC CTGGCTATCC GGGTTGTGCT GGTCTTCGCC CTGCTCGGGG TCGTCATCAT GCTCGTCGGC TGGGTTGAGG ACATCGCGGC TCGGCGTCGG CCCGAGTTGA TCCCCGGTTT CGGGCGAAGA GCGGCATCCG CGCCCGAGGC GGCAGCGGAG CAACCCGCGT CCGGTTCGGC GGGGCAGGTC GGGACGGTGC GCAAGCAGCC GGTGGTGCCG ACGCCCCGGT CGGCGGAGAA CGAGCGCGTG CAGGCTGGGA GCGTGGACAG CAACGCGCGG TGA
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Protein sequence | MRKFTFSSGG LALFRSPAEG RGLCFPPLTG NSSKLMRNRY LDLLRALAVV RVVVYHVTGW AAMTLVFPAM SVMFALAGSL MAASLHRFGT AAVGRRLRRL LPSLWMLAAI FVPAMLLTGL PLTPKVLLWL FPVSDPPANH WGALALSPIW YLRNYLWFVL VSPLAWWLFR RAPLPTLLVP YALTAAIELG LYPNPPMVVQ QFGLYLGAWM LGFAHQEGML RRLANRVLWP TAIALVALGG WWNLTQPGTK GLDLNGNPLA NALWSAGVIL VVLGREPAKT AWIDRNALVS RLVTLINRRA LTVYLWHMAF VVALTPLVDV VGWSHQNLLG LAIRVVLVFA LLGVVIMLVG WVEDIAARRR PELIPGFGRR AASAPEAAAE QPASGSAGQV GTVRKQPVVP TPRSAENERV QAGSVDSNAR
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