Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3360 |
Symbol | |
ID | 5059826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3854095 |
End bp | 3854766 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640475608 |
Product | hypothetical protein |
Protein accession | YP_001160171 |
Protein GI | 145595874 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.651289 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGGGGGA ATATCGGACC GCGGGTCGCT CAGCTGTCGC CCCTGGAACG GGTACGGCTG CGCCGCGTCG CCGTACGCTA CGCGCTGCAC GGCTGGGAGG TGACGCCCGG CGCGTTCCTG GCCCGCAGCC GCTTCGTCTG CGGGCGGGCG GGCTGCCCCA CCGTCGGCTG TCATCCTGCG TTGGTGGACT GGGAGCACTC CGCCAGTTCC GACCCGGCCC GGGTCGCGAC GTGGTGGCGT ACCCGGCCGC ACGGCGTTCT GCTACCCACC GGGCGGGCCT TCGACGTCCT GGAGGTGTCG GCCCACCTCG GACGAGACGT ACTCCTCGCG GTCCAGAACC ATCCGGCCGG CCCGGGAGTA CGCGGGCCGG TGCTGTCCAC TCCCACCGGC CGGTGGATGT TCCTGGTCCG ACCCGGCGAC CCGCTTCGAC CCGAACTCGA ACACTGCTTC CACGTGGTAC GGCACGGCCC GGGTTCGTGG ATCCCCGCAC CGCCGACGCG GCTACCCGAG GGTGCCGTGC GTTGGGTGGT CGCCCCGGAG CAGGCACGCT GGCAGCTCCC CGACTCGTAC CTGTTGCAGA ACAGTCTGAT CGCCGAGTTA CGGGCGAACG GGGTGCCGCT GGCAGCGGAG CTGGTCCCCG GCCACCTGCC GCTTCCTCGG CAGGGTTGCT GA
|
Protein sequence | MWGNIGPRVA QLSPLERVRL RRVAVRYALH GWEVTPGAFL ARSRFVCGRA GCPTVGCHPA LVDWEHSASS DPARVATWWR TRPHGVLLPT GRAFDVLEVS AHLGRDVLLA VQNHPAGPGV RGPVLSTPTG RWMFLVRPGD PLRPELEHCF HVVRHGPGSW IPAPPTRLPE GAVRWVVAPE QARWQLPDSY LLQNSLIAEL RANGVPLAAE LVPGHLPLPR QGC
|
| |