| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3339 |
|---|
| Symbol | |
|---|
| ID | 5059804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3833836 |
|---|
| End bp | 3835191 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640475587 |
|---|
| Product | glutamine synthetase, type I |
|---|
| Protein accession | YP_001160151 |
|---|
| Protein GI | 145595854 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.301848 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAGTGG ACCGTCAGCA GGAGTTCGTC CTCCGTACGC TGGAAGAGCG GGACATCCGG
TTCGTCCGGC TGTGGTTCAC CGACGTGTTG GGCACGCTGA AGAGCGTGTC GGTGGCCCCC
GCGGAGCTGG AGTCCGCCTT CGAGGAGGGC ATCGGGTTCG ACGGTTCGGC GATCGAGGGT
TTCGCCCGGG TCGTCGAGTC CGACATGGTG GCGATGCCGG ACCCGACCAC GTTCCAGGTC
TTCCCCTTCG AGGGCGGAGT CAGCGGCGAG AGCGCCCGGA TGTTCTGCGA CATCCTGCTC
CCCGACGGTA GCCCGTCCTG GGCCGACCCG CGTCACGTGC TGCGTCGGGC GCTGTCGAAG
GCGGCGGAGA AGGGCTTCAC CTACTACACC CATCCGGAGA TCGAGTTCTA CCTGCTGGAG
GATGGGGCGC CGGACGGCTC GGTGCCGATC CCGGTCGACA CCGGCGGCTA CTTCGAGCAC
ACCACGCACG CGGTCGCCCG GGACTTCCGC CGACAGGCCG TACTCGCGCT GGAACGAATC
GGAATCTCCG TCGAATTCAG CCACCACGAG GTCGCTCCCG GTCAGCAGGA GATCGACCTG
CGCTACGCCG ACGCGCTCAA CACCGCCGAC AACATCATGA CCTTCCGGCA CGTGGTCAAG
GAGGTGGCGC TCTCCACCGG GGTGCAGGCC ACCTTCATGC CGAAGCCCTT CACCGACCAG
CCGGGCAGCG GCATGCACAC CCACCTCTCG CTATTCGAGG GGGAGCGCAA CGCGTTCCAC
GACGGCGGCG ACCCGATGAA GCTCTCCAAG GTGGCCCGCG CGTTCATCGC CGGCCTGCTG
GTACACGCGC GGGAGTACAC GGCGGTCACC AACCAGTGGG TCAACTCGTT CAAGCGGCTG
TTCCCGCAGG CCCTGCCGAA CCGGGTCACC GAGAGTCCCG CGTACGTCTG CTGGGGGCAC
CTGAACCGCT CCGCGCTGGT CCGGGTCCCG GCGTACGGCA AGCCGAATTC GGCCCGGGTC
GAGGTCCGGT CGCCCGACTC GGCGACCAAC CCGTACCTGG CCTTCGCGGT GATGCTCGGC
GCCGGCCTCA AGGGCATCGA GGAGGGGTAC GAGCTCCCGC CGGGCGCCGA GGACGATGTG
TGGTCGCTGA CCAGTGCCGA GCGCCGAGCG ATGGGCTACG AGCCGCTGCC GGAGAACCTC
GCCGAGGCGA TCGACGTGAT GGCCGGCTCC GAACTGGTCG CCGAGGTGCT CGGCGAGCAC
GTCTTCGACT TCTTCCTGCG CAACAAGCGG TCCGAGTGGG AGCAGTACCG CCGCGAGGTC
ACGCCGTACG AGCGGCAGCA CTACCTCTCG CTCTGA
|
|---|
| Protein sequence | MEVDRQQEFV LRTLEERDIR FVRLWFTDVL GTLKSVSVAP AELESAFEEG IGFDGSAIEG
FARVVESDMV AMPDPTTFQV FPFEGGVSGE SARMFCDILL PDGSPSWADP RHVLRRALSK
AAEKGFTYYT HPEIEFYLLE DGAPDGSVPI PVDTGGYFEH TTHAVARDFR RQAVLALERI
GISVEFSHHE VAPGQQEIDL RYADALNTAD NIMTFRHVVK EVALSTGVQA TFMPKPFTDQ
PGSGMHTHLS LFEGERNAFH DGGDPMKLSK VARAFIAGLL VHAREYTAVT NQWVNSFKRL
FPQALPNRVT ESPAYVCWGH LNRSALVRVP AYGKPNSARV EVRSPDSATN PYLAFAVMLG
AGLKGIEEGY ELPPGAEDDV WSLTSAERRA MGYEPLPENL AEAIDVMAGS ELVAEVLGEH
VFDFFLRNKR SEWEQYRREV TPYERQHYLS L
|
|---|
| |