| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3279 |
|---|
| Symbol | |
|---|
| ID | 5059744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3762786 |
|---|
| End bp | 3763451 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640475527 |
|---|
| Product | response regulator receiver |
|---|
| Protein accession | YP_001160091 |
|---|
| Protein GI | 145595794 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.97215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC CGACACCAGC CACTCGCACC AAGGTCCTCC TCGTGGACGA TCACGACCTG
ATTCGCAAAG GGCTACGGCA CGCCTTCGAG CGCGACCGGC AGTTCGAGGT CGTCGGCGAG
GCTGCCACCG CGGCCGAGGG GGTCCGCCAG GCCGGTGCCC TCCAGCCAGA CGTGGTCATC
ATGGACCTGC GACTGCCCGA CGGGAGCGGC CTCGAGGCCA CCCGCGCACT GCGTAAGTCC
AGCGCCACGA TGGGTATCGT CGTGCTGACC ATGTACGCCG GCGACGACCA GCTCTTCGGC
GCGCTCGAGG CGGGCGCGAG CGCCTTCGTC CCGAAGACCG CCCCGGCGGA TGAGGTGGTC
GCCGCCGCCC GGCACGCCGC CTCCTCGCCC AGTGCCTTCA CCGCCGCCGA CCTGGCCGAG
GCGATGAAGC GTCGGCTGGC CCCGTCCGGG CCGCAGCTGT CCCCACGCGA GGGGCAGGTG
CTACGCCTGC TTGCCGACGG AATGAGCGTG GCCGGCATCG CCAAGCAGCT CTTCGTCAGT
GAGTCCACTG CCAAGACCCA CATTTCCAAA CTGTACGAGA AGCTCGGCGC CGCCAATCGC
GCCCAGGCAT TGATGACAGC GCTCCGGCTC GGTCTCCTCG AGGCCCCCGA CGCGCCCAAA
TTCTGA
|
|---|
| Protein sequence | MTTPTPATRT KVLLVDDHDL IRKGLRHAFE RDRQFEVVGE AATAAEGVRQ AGALQPDVVI
MDLRLPDGSG LEATRALRKS SATMGIVVLT MYAGDDQLFG ALEAGASAFV PKTAPADEVV
AAARHAASSP SAFTAADLAE AMKRRLAPSG PQLSPREGQV LRLLADGMSV AGIAKQLFVS
ESTAKTHISK LYEKLGAANR AQALMTALRL GLLEAPDAPK F
|
|---|
| |