Gene Strop_3241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3241 
Symbol 
ID5059706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3717837 
End bp3718694 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content74% 
IMG OID640475489 
Producthypothetical protein 
Protein accessionYP_001160053 
Protein GI145595756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.784932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.111789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTCTT TAGCTATTTG TATTGCGCTG TTCTGTCAGC ACAACAGCAC AACAGCACGA 
CAGGGGGTAG GTCCGATGGC GGGCCGTATG GTGGTCGGTT CTGCCGCGTT GGCGGGTCTG
GTGCGCCCGG CGAGTGCGCC GGACCCGGCC GGGGGGCACC GGGTGCTGCC GGTTACCCCC
GAGCTGACCG GCCTGCTGCC CAGCCGGGGG CTACGCCGCG GCAGCACGAT TTCGGTCGCC
GCTGGCCAGC CCCGGCACAG CGGCACCACC TCGCTGACCC TGGCGCTGCT CGCCGAGGCG
TCTCAGGCCG GCTCGTGGTG TGCCGTGGTT GGGGTGCCGA CCCTCGGGGC GGTCGCCGCT
GCCGAGTTCG GGATCGCCCT GGACCGGCTC GCCCTCGTGC CGCACCCGGG ACCCGAGTGG
GCCACCGTCG TCGCCACGTT GATCGACGGG GTGGACGTCG TGGTCGCCGC AGTCCCGGCC
ACGGTGTCCG CATCGGTCGC CAGTCGGCTG GCGGCTCGGG CCCGGCAGCG GGGCAGCGTC
CTCGTCTCGT ACGGACGGTG GGACGGCGCC GACCTGACCC TTCAGGTAAC CCGGGGAGTC
TGGCAGGGCG TCGGTGTCGG CCGGGGCCGA CTGCGGCGGC GGGAGGTCAC CGTGGCGGCG
CGGGGACGGG GCACCGCCAC CCGTCCCCGG GAGGTGACGA TCTGGCTGCC CGGTGCTGGT
TCGACCCAGG TGGTTTCGGG GTCGAACCCC GGCGCCCGGG CAGCTTCGCC CACTGGTCGG
TCCGGTGCCG GCCGACTCCG AGCGGTGCCA CCGGCCACCG ACGCACCCCG GCCGTTCACC
CTGGCCGGTC CGGGATGA
 
Protein sequence
MSSLAICIAL FCQHNSTTAR QGVGPMAGRM VVGSAALAGL VRPASAPDPA GGHRVLPVTP 
ELTGLLPSRG LRRGSTISVA AGQPRHSGTT SLTLALLAEA SQAGSWCAVV GVPTLGAVAA
AEFGIALDRL ALVPHPGPEW ATVVATLIDG VDVVVAAVPA TVSASVASRL AARARQRGSV
LVSYGRWDGA DLTLQVTRGV WQGVGVGRGR LRRREVTVAA RGRGTATRPR EVTIWLPGAG
STQVVSGSNP GARAASPTGR SGAGRLRAVP PATDAPRPFT LAGPG