Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3229 |
Symbol | |
ID | 5059694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3698993 |
End bp | 3700459 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640475477 |
Product | putative monovalent cation/H+ antiporter subunit D |
Protein accession | YP_001160041 |
Protein GI | 145595744 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.121013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGTCC TGCTGATTGT TCCGGTGGTG GGTCCGTTAC TCGCCGCCGC CGTGCTGTTC GCTGTCCCGG ACCGGCTGGT GCTGCGCCGG GTGGTGGCGC TGCTCGCCAC GGCGGCCGTC ATTGCGGTGG GTGTCGTCCT GCTGGTGGTG ACGTCCGACG GCGAGGTCCC GGTGCTCCGG GTCGGCGGCT GGCCGCCGGT TGTCGCGATC ACCTTGGCGG CCGACCCACT GAGCGCGTTG CTGGTCACGG TCTCGGCGAT CGTGGTGCTG GCCTGCCTGG TGGCCGCCGC CGGGACCGGG GACGACCGCC GACAGGCCTT CCTGCCGTTG ACGATGGTGC TGTCGGCGGG CGCATACGGC GCCTACCTCA CCACCGATCT GTTCAACCTG TTCGTGCTGG TCGAGGTCAC GCTTGTCCCG TCCTACGTGT TGTTGGCACT CTCCGGCGGC CCGGGGCGCG CCGGCGCGGG CCGGGTGTAC ATCGCCACCA ATCTGCTCGG CTCCACGATC CTGCTCGCCG GCGTCGGACT GCTCTACGGG GTCGCCGGCA CGGTCGGGCT CGGGGACCTC GCCGGCGTGG CCCGTGAGGT CCCCGCCGCC GCGGTCGCCG GCGGTGTCGT GCTGCTGGCG TTCGCGCTCA AGGGCGCGCT CGTGCCGCTG CACGACTGGC TGCCGCGCGC CTACCCGGTC GCGTCACCGG TGGTTGTCGC GCTCTTCTCC GGTCTGCTCA CCAAGGTGGG GCTGTACGCG ATCATCCGGA TCTACGCCGT GTTGTACGGC GGTGACCCGG CATACCATCC GTTGTTGGTG GCGGCGGCGC TGGCGTCCAT GGTGATCGGG GTCCTCGGCG CGATCGGCGT CGGTTCGATG CGGAAGGTGC TGGCCTTCCA CATGGTGAGC CAGATCGGGT ACGTGCTGCT TGGGCTGGCC CTGTTCACCG CCGCGAGTCT CGCCGCCGCC GTCTTCTACC TGGCCCAGTA CGTGCTGGTG AAGGCGGCGC TGTTCTTGTG CGCGGCGGCG GTGCGGGCCA CCCGCGGCAC CGACCGGTTG AGCCGGCTGG GTGGGCTGGC CTCATCCAGC CCGCTGCTCG CGTTGGCCTT CGGCGTCGCT GCTCTGTCGC TGGCCGGTCT GCCTCCGTTC GGCGGGTTCC TCGCCAAGTT CCTGGTGCTG CGGGCCGCCA ACGAGGTCGG TGATTGGCTC GTGCTGACGG TGGCGGTGTT GGTCAGCCTG GTGACGCTGC TGTCGATGCT GAAGATCTGG GGGGTCGTGT TCTGGGGTGA GGTGCCGCGG GCGGCCCGGG AGCGGACCGC CCGCCCCGGC GCGGCGCTGC TCGGACCGCC GTTGGCGCTC GGCGTGTGCG CGCTGCTGCT CGGGCCGTTG GGCGGGCCGC TGTTGCAGGT GGCCGACGCC GCCGCGGCGG GGCTACTGGA GCCGGCGGGG TATGTGCGGG CGGTGAGCGG ACGATGA
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Protein sequence | MSVLLIVPVV GPLLAAAVLF AVPDRLVLRR VVALLATAAV IAVGVVLLVV TSDGEVPVLR VGGWPPVVAI TLAADPLSAL LVTVSAIVVL ACLVAAAGTG DDRRQAFLPL TMVLSAGAYG AYLTTDLFNL FVLVEVTLVP SYVLLALSGG PGRAGAGRVY IATNLLGSTI LLAGVGLLYG VAGTVGLGDL AGVAREVPAA AVAGGVVLLA FALKGALVPL HDWLPRAYPV ASPVVVALFS GLLTKVGLYA IIRIYAVLYG GDPAYHPLLV AAALASMVIG VLGAIGVGSM RKVLAFHMVS QIGYVLLGLA LFTAASLAAA VFYLAQYVLV KAALFLCAAA VRATRGTDRL SRLGGLASSS PLLALAFGVA ALSLAGLPPF GGFLAKFLVL RAANEVGDWL VLTVAVLVSL VTLLSMLKIW GVVFWGEVPR AARERTARPG AALLGPPLAL GVCALLLGPL GGPLLQVADA AAAGLLEPAG YVRAVSGR
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