Gene Strop_3215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3215 
SymbolmraY 
ID5059680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3682963 
End bp3684087 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content66% 
IMG OID640475463 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_001160027 
Protein GI145595730 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0811991 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCAG TCATCGTCGC GGTCGGGGTA GCCTTCCTGG TCTCGCTGTT CTGTACACCG 
ATCGCGATCA AAGTCTTCAC CCGGTTGAAG GCCGGCCAGC CCATCCGGGC CGAGGGCCCG
GTGATGCACC AGGGTAAGAA GGGCACACCG ACGATGGGCG GGGTGGTCTT CATCCTGGCC
ACCGTTATCG CGTACGTCGC CGGTCACCTG GCCCTGACCA CACTGCCGGA CGCGCAGATC
GCTCAGGTCG AACCGACCAT CACGGCGCTG GTGCTGCTGG GGCTGATGGT CTTCTCCGGC
GCGGTGGGCT TCATCGACGA CTTCCTGAAG GTCCGCAAGC GGCACAGCGG TGGCCTCAAC
AAGCGGGGCA AGCTGCTCGG CCAGATCCTG GTCGGGGCGG TGTTCGGGGT GATCGCGCTC
TACTTCCCGA GCACCATGAC CGACTCTCAG GGCACGTTGA CCAACACCGA GACGGTCGGC
AGCACGACGT TGAGTTTCAT CCGGGACATC CCCGCGCTGG AGCTCACCAA GGTCGGCGCG
GTCGTCCTCT TCATCTTCGT GGTGATGGCG GCCACCAACG GCGTCAACCT CACCGACGGT
CTGGACGGCC TGGCCACCGG CGCCTCGGTG ATGGTGCTCG CGGCGTACGC GCTGATCGCC
TTCTGGCAGT ACCGGCACTG GTGCGCCGAC CCGAACTACA CCCAGGAGTA CTGCTACGCG
GTTCGGGACC CACTGGAGGT CGCGCTGATC GCCGGGGCGG CGGCCGGAGC CTGTGTCGGG
TTCCTGTGGT GGAACACGTC CCCGGCCCGG ATCTTCATGG GCGACACCGG GGCGCTCGGC
CTGGGGGGTC TGATCGCCGG TATGGCGATG TCGACCCGGA CGATCCTGCT GCTGCCGATC
ATCGGCGGAC TCTTCGTCAT CATCACGATG TCCGTGGTGA TCCAGATCAT CTCCTTCCGG
ACCACCGGCA AGCGGGTCTT CCGGATGTCA CCGTTGCAGC ACCACTTCGA GCTCGCCGGC
TGGAGCGAGG TCAACATCGT GGTGCGGTTC TGGATCATCG CCGGCATCGG TGTGGCAATC
GCCCTGGGCC TGTTCTACAG CGAGTTCCTC GCCCGCGTCG GTTGA
 
Protein sequence
MRAVIVAVGV AFLVSLFCTP IAIKVFTRLK AGQPIRAEGP VMHQGKKGTP TMGGVVFILA 
TVIAYVAGHL ALTTLPDAQI AQVEPTITAL VLLGLMVFSG AVGFIDDFLK VRKRHSGGLN
KRGKLLGQIL VGAVFGVIAL YFPSTMTDSQ GTLTNTETVG STTLSFIRDI PALELTKVGA
VVLFIFVVMA ATNGVNLTDG LDGLATGASV MVLAAYALIA FWQYRHWCAD PNYTQEYCYA
VRDPLEVALI AGAAAGACVG FLWWNTSPAR IFMGDTGALG LGGLIAGMAM STRTILLLPI
IGGLFVIITM SVVIQIISFR TTGKRVFRMS PLQHHFELAG WSEVNIVVRF WIIAGIGVAI
ALGLFYSEFL ARVG