| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3178 |
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| Symbol | |
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| ID | 5059643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3648067 |
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| End bp | 3648822 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475426 |
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| Product | multidrug ABC transporter inner membrane protein |
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| Protein accession | YP_001159990 |
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| Protein GI | 145595693 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.458252 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCCCC GAATCCTCGT GGCCACCACC GGCCGCATCC TGCGCCAACT GCGCCATGAC
CGGCGTACGG TCGCGCTACT CGTGGTCGTG CCCGCGGCGC TTCTCGCGGT GGTCTACTAC
ATGTACGTTG ACCAGCCGAC ACCACCAGGC CAGCCGGCGC CGTTCGATCG GATCGCGCTG
GTGCTGCTGG GGTTCTTCCC CTTCATCATC ATGTTCCTGG TGACCAGCAT CGCCATGCTG
CGGGAACGCA CCAGTGGCAC GCTGGAACGA CTACTCACCA CCCCCTTGGG CAAACTCGAC
CTGCTCTTCG GGTACGGCAT CGCGTTCGGC CTGGCCGCCG TGGTGCAGGC GGCGGTCGCG
GCCGCGGTGG CCTACTGGCT GTTCGATCTC GACACCGCCG GTAGCAGCGG TCTGGTCATC
CTGATCGCGG CGGTCAACGC CGTGCTCGCC GTCGCGCTCG GGCTCTTCTG TAGCGCCTTC
GCCCGGACCG AGTTCCAGGC CGTACAGTTC ATGCCGGTCG TGGTCGCCCC GCAGCTGCTC
CTCTGCGGGC TCTTCGTCCC CCGTGACGAG ATGGCCGGCT GGCTCCAGGC GGTCAGCGAT
GTCCTGCCCC TGTCCTACTC GGTCGAGGCG TTACAGGAAG TCGGCTCGAG CACCGAACCG
ACCGTAACGA TGTGGCGCGA CCTTGCGATC GTGGGCGGCG CCACGGTGCT GGCGTTGGTG
CTCGCCGCCG CCACCCTGCG ACGACGCAGC GGCTGA
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| Protein sequence | MNPRILVATT GRILRQLRHD RRTVALLVVV PAALLAVVYY MYVDQPTPPG QPAPFDRIAL
VLLGFFPFII MFLVTSIAML RERTSGTLER LLTTPLGKLD LLFGYGIAFG LAAVVQAAVA
AAVAYWLFDL DTAGSSGLVI LIAAVNAVLA VALGLFCSAF ARTEFQAVQF MPVVVAPQLL
LCGLFVPRDE MAGWLQAVSD VLPLSYSVEA LQEVGSSTEP TVTMWRDLAI VGGATVLALV
LAAATLRRRS G
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