| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3166 |
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| Symbol | |
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| ID | 5059631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3632155 |
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| End bp | 3633660 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640475414 |
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| Product | glutamate synthase, NADH/NADPH, small subunit |
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| Protein accession | YP_001159978 |
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| Protein GI | 145595681 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0116079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGACT CGTTTGGTTT CCTGCGTTAC GACCGGCAAC TGCCCGCCCG CCGGCCCGTG
CCGGTGCGGA TCATGGACTG GCGTGAGGTC TACCCACCGG CGGGTGAACA GCTGATCCGG
GAGCAGGCCA CTCGCTGCAT GGACTGCGGT ATTCCGTTCT GCCACGATGG CTGCCCGCTG
GGCAATCGCA TCCCGGACTG GAATGACCTG GTCCGTACCG GTGGCTGGGA TGCCGCGGTG
GAGACGCTGC ACGCCACCAA CAACTTTCCG GAGTTCACCG GTCGGCTCTG CCCGGCACCC
TGCGAGGCGG CCTGTGTACT CGGTCTCGGC GGCCAGCAGC CGGTCACGAT CAAACAGGTC
GAGGTGGCGA TCGCTGATGC TGCCGTAGCC CACGGCGGGC TGCGGCCCCG GTCGGTGCCG
CGCGCCAGCG GCAGGTCGGT GGCGGTGGTC GGCTCCGGGC CCGCCGGGCT CGCCGCTGCG
CAGCAACTGG TCCGGGCCGG GCACGCGGTC ACCGTGTACG AGCGGGACGA CGCCCTCGGT
GGCCTGCTGC GGTACGGCAT CCCGGACTTC AAGCTGGAGA AGCATCACAT CGACCGGCGG
CTGGCGCAGC TCGCCGCCGA GGGAGTGCGT TTCCGGACCG GGGTGGAGGT CGGTGTCGAG
GTAACCGCCG AGCAGCTGCG GGCCGAGCAC GACGCGGTGC TGCTCGCCTG CGGCGCCCTC
GCCAGCCGGG ACACGCCAGC AACCCCCGGC CGATCGCTAC GCGGGATTCA CCAGGCGATG
GGGCACCTCG TCGCGGCCAA CCGGGTGGTC GCCGCCGCGG AGGCCAACCC TCCGGCCGCC
GCGGTGTTGC CGGACGGTAC GCCGATCGAC GCGGCCGGCC GGAACGTCGT CATCATCGGT
GGCGGAGACA CCGGCGCGGA CTGCCTCGGC GTCGCACACC GACAGGGTGC CACCGCGGTG
TACCAGCTTG ACCTCTATCC GCAGCCGTCC CAGGCGCGGG ACGAGGCGCG GGATCCGTGG
CCGACCTGGC CGTGGATCCT GCGGGAGTAC CCGGCACACG AGGAGGGCGG GGAGCGGATC
TTCGCCGTCG CCGTGCAGGA GTTCGTGGAC GACGGCAGCG GCGCGGTGCG GGCGGTCCGC
ATCGCCGAGG TGACGGTCGA GAAGAGCGCC GGTCGGCGAG TCGTCACCCC GGTGCCGGGC
ACCGAGCGGG AGCTGCCGGC CGATCTGGTG CTGCTGGCGA TCGGTTTCGA CGGCACGGAG
CCGCAGCCGC TGCTTGAGCA GCTCGGGGTG TCCCGCAACG AACGGGGCGC GGTGGACGCC
CGTTCGGACT GGCAGACCGA CGTGGACGGC GTCTTCGTCG CCGGAGACAT GCACCGGGGT
GCGTCGTTGA TCGTGTGGGC GATCGCCGAG GGCCGGGCTG CTGCTGCCGC CATCCACTCG
TACCTGGATG GGCGGGGTTC GCTACCGGCG CCGGTGGAAC CGGGTGCCCG GCCGCTGGCC
GTCTGA
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| Protein sequence | MPDSFGFLRY DRQLPARRPV PVRIMDWREV YPPAGEQLIR EQATRCMDCG IPFCHDGCPL
GNRIPDWNDL VRTGGWDAAV ETLHATNNFP EFTGRLCPAP CEAACVLGLG GQQPVTIKQV
EVAIADAAVA HGGLRPRSVP RASGRSVAVV GSGPAGLAAA QQLVRAGHAV TVYERDDALG
GLLRYGIPDF KLEKHHIDRR LAQLAAEGVR FRTGVEVGVE VTAEQLRAEH DAVLLACGAL
ASRDTPATPG RSLRGIHQAM GHLVAANRVV AAAEANPPAA AVLPDGTPID AAGRNVVIIG
GGDTGADCLG VAHRQGATAV YQLDLYPQPS QARDEARDPW PTWPWILREY PAHEEGGERI
FAVAVQEFVD DGSGAVRAVR IAEVTVEKSA GRRVVTPVPG TERELPADLV LLAIGFDGTE
PQPLLEQLGV SRNERGAVDA RSDWQTDVDG VFVAGDMHRG ASLIVWAIAE GRAAAAAIHS
YLDGRGSLPA PVEPGARPLA V
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