| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3145 |
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| Symbol | |
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| ID | 5059609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3609210 |
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| End bp | 3611909 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640475392 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001159957 |
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| Protein GI | 145595660 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGCCA CGAAGCCGCG CCTACTCCTC GTTGACGGAC ACTCCCTGGC TTACCGGGCA
TTCTTCGCCC TGCCGGTCGA GAACTTCTCC ACCACGACGG GGCAACCGAC CAACGCGGTC
TACGGCTTCA CCTCCATGTT GATCAACGTT CTCCGGGACG AGCAGCCAAC GCACATCGCC
GTGGCCTTCG ACGTCTCCCG AGTCTCCTTC CGCACCGAGA AGTACGCGGC GTACAAAGCC
GGCCGCAGCG AGACCCCGAC AGATTTCAAG GGTCAGGTCA GCCTGGTCAA GGAGATCCTG
GCGGCGTTGC GCATCCCGGC GGTGGAGATG GCGGGCTACG AGGCGGACGA CGTGATCGCC
ACGCTCACCC GTCAGGCCCG TGATCAGGAC ATGGCGGTCC TGATCACCAC CGGTGACCGG
GACGCCTTCC AACTTGTCGA CGACGATGTC ACTGTTCTCT ACCCCCGAAA GGGCGTTTCG
GACCTGGCCC GGATGGACCC GGCTGCGGTG ACGGCGAAGT ACGGGGTACC TCCGCAGCAC
TATCGGGACC TCGCCGCGTT GGTTGGCGAG ACCAGCGACA ATCTGCCCGG CGTTCCGGGC
GTCGGCCCGA AGACCGCCGC CAAATGGATC ACCGCCTACG GTGGGGTCGA GGGTGTCGTT
GCCCGGGCCG ACGAGATCAA GGGCAAGGCC GGGGCGAGTC TTCGGGAGCG ACTCGCCGAC
GTGATTCGTA ATCACGAGCT CAACTGCCTG GTCGCCGACC TGGATCTGCC CCTGTCACCG
GAGGAGACGC GCTGGGCCGG CTGGGACCGG GAGGCGGTGC ACCAGGTTTT CGACACGCTG
GAGTTCCGTA TCCTTCGGGA TCGGCTCTAC CAGTACCTGG ACGCTGTTGA GCCGGAGGCC
GAGGCGGGTT TCGACCTGGC CGGTGAGCTC CTCGTCGAGC CGGGGGCACT CGCCGCATGG
CTGGGCGCGC ACGCGACACC AGGCACGCCG GTCGGCCTCG CCGTCACGCT CGACACCGGG
CCCAACCGGC GGCACCTCGC CGATGTGACC GGCATGGCGC TGGCAACCGC CGCCGGGGCC
GGGGCGTGGT TCGACCCCGG CCGACTCGAC GCCGCCGACG AGGATGCCCT GGCGGGGTGG
CTGGCCGATG TGAGCCGACC GAAGGTGCTG CACGACAGCA AACCGGCGGT GCTCGCGTTC
GCCGCGCGCG GGTGCGCGAT CCAGGGCATC GCCAGGGACA CGCAGATCGC CGCCTACCTG
GCCCGGCCCG ATCAGCGCTC CTACGACCTG ACCGACCTGG CCCTGCGGTA CCTGCACCGG
GAGCTGCGGG TGGACCTGCC GGAAACTGGC CAGCTCACCC TCGATGGCCT GGGCAATGAC
GGTGAGGCCG AGCAGAACCT GATGCTGCGG GCTCGGGCTA CCCTCGACCT CGCCGATGCG
ATCGACGCGG AGTTGTCTCG CGATGGTGAG CAGTCGGCCC GGCTGATGGC TGAGGTGGAG
CTGCCGCTGA TGCGGGTTCT CGCGGGTATG GAGCGCACCG GCATCGCCGC TGACACGCAG
TACTTGTCCG AGTTGGAGGC GCACTTCGCC GCCGAGGTGA AGGCCGCCGC GCAGGGTGCG
TACGAGGCGG TCGGGCGTGA GTTCAACCTG GGCTCCCCGA AGCAGTTGCA GGAGATCCTC
TTCGGCGAGC TGGGCCTGCC CAAGACCAAG CGGATCAAGA CCGGTTACAC CACCGATGCG
GACGCCCTGC AGTGGCTGTA CGGGCAGAAC CCGCACCCGG TGCTCGGGCA CCTGCTGCGC
CACCGAGACG TGGCGAAGCT GAAGACCACG GTCGACGGGC TACTCAAGTC GGTCTCCGAC
GACGGTCGAA TTCATACCAC CTTCAACCAG ACCGTGGCGG CGACCGGCCG GCTCTCCTCC
ACCGAGCCGA ACCTGCAGAA CATTCCGATC CGCACCGAGG AGGGGCGGCG GATCCGCCGG
GCGTTCGTGG TCGGCACGGG GTACGAATGC CTGCTCACCG CCGACTACAG CCAGATCGAG
ATGCGGATCA TGGCACACCT GTCCGCGGAT GAGGCTCTGA TCGACGCCTT CAACTCGGGC
CTCGACTTCC ACGCCGCCAC CGCCTCGTCG GTCTTCCAGG TGCCGGTGGA GGCGGTCACC
GCCGACCAGC GGCGCAAGAT CAAGGCGATG AACTACGGCC TGGCGTACGG GCTGAGCGCG
TTCGGCCTCT CCCAGCAGCT CGGCGTCACC GCCGAGGAGG CGCGCGGGCT GATGGAGACC
TACTTCGCCG GTTTCGGTGG GGTGCGCGAC TATCTGCAGG AGGTGGTGGC CCGGGCTCGC
CGCGACGGCT ACACCGAGAG CGTCCTCGGC CGTCGCCGCT ACCTGCCCGA CCTGGTCAGC
GACAACCGGC AGCGGCGGGA GATGGCCGAG CGGATGGCGC TCAACGCCCC GATCCAGGGC
TCTGCCGCCG ACATCATCAA GGTGGCGATG ATGAACGTCG ACGCAGCGGT GCGCGAGGCC
GGGCTGCGTT CCCGGATGCT GCTCCAGGTG CACGACGAAC TGGTCTTCGA GGTGGCCCCC
GGGGAGCGGG AGGCGCTGGA GGCGTTGGTC CGGCGGGAGA TGGGCGGGGC GTTCCCGCTG
TCCGTGCCGC TGGAGGTGTC GGTCGGCGAC GGGCGGGACT GGAACAGCGC CGACCACTGA
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| Protein sequence | MTATKPRLLL VDGHSLAYRA FFALPVENFS TTTGQPTNAV YGFTSMLINV LRDEQPTHIA
VAFDVSRVSF RTEKYAAYKA GRSETPTDFK GQVSLVKEIL AALRIPAVEM AGYEADDVIA
TLTRQARDQD MAVLITTGDR DAFQLVDDDV TVLYPRKGVS DLARMDPAAV TAKYGVPPQH
YRDLAALVGE TSDNLPGVPG VGPKTAAKWI TAYGGVEGVV ARADEIKGKA GASLRERLAD
VIRNHELNCL VADLDLPLSP EETRWAGWDR EAVHQVFDTL EFRILRDRLY QYLDAVEPEA
EAGFDLAGEL LVEPGALAAW LGAHATPGTP VGLAVTLDTG PNRRHLADVT GMALATAAGA
GAWFDPGRLD AADEDALAGW LADVSRPKVL HDSKPAVLAF AARGCAIQGI ARDTQIAAYL
ARPDQRSYDL TDLALRYLHR ELRVDLPETG QLTLDGLGND GEAEQNLMLR ARATLDLADA
IDAELSRDGE QSARLMAEVE LPLMRVLAGM ERTGIAADTQ YLSELEAHFA AEVKAAAQGA
YEAVGREFNL GSPKQLQEIL FGELGLPKTK RIKTGYTTDA DALQWLYGQN PHPVLGHLLR
HRDVAKLKTT VDGLLKSVSD DGRIHTTFNQ TVAATGRLSS TEPNLQNIPI RTEEGRRIRR
AFVVGTGYEC LLTADYSQIE MRIMAHLSAD EALIDAFNSG LDFHAATASS VFQVPVEAVT
ADQRRKIKAM NYGLAYGLSA FGLSQQLGVT AEEARGLMET YFAGFGGVRD YLQEVVARAR
RDGYTESVLG RRRYLPDLVS DNRQRREMAE RMALNAPIQG SAADIIKVAM MNVDAAVREA
GLRSRMLLQV HDELVFEVAP GEREALEALV RREMGGAFPL SVPLEVSVGD GRDWNSADH
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