Gene Strop_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3133 
Symbol 
ID5059597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3595558 
End bp3596409 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content72% 
IMG OID640475380 
Productbeta-lactamase 
Protein accessionYP_001159945 
Protein GI145595648 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTTCG TCGGTCTCGA CGCGCACCTC GACCGGGTGC CCGGCACCGT CTCGGCCTAC 
CTGGCCCGCC TCGACGCCAC CGCCCCCACC TGGATCCGGC ACCCGGCCAC CACCCACTAT
GCGGCCAGCA CGATGAAGGT GGCGGTGCTG GTGGCGCTGT ACCGCGCTCT GGAGGCCGGG
CGCCTCGCTT CGGACACCGC CGTACCGGTG CGCAACGAGT TCGACTCGGC CCAGCCCGGC
GCGGCCCGGT TCGGCTGCAC CCGCCCCGTC CACAACGACG ACGACGTCTG GGACCGGCTC
GGCGGCACCG CCCCGCTACG CTGGCTGGCC GAACGCATGA TTGTCCGATC CAGCAACCTC
GCCACCAACC TGCTTCTGGA CCAGGTCGGC CTGCCGGCCG TCGCCGACGT CTGGGCCCGG
GCCGGGGCCC GGCACAGTGT CACCGGCCGC GGTATTGAGG ACTTCGCCGC CCGTGCGGGC
GGCATCACCA ACCTGATCAC CGCCGCCGAC CTCGCCGCCC TCCTGCGCGA CCTGGCGCTC
GGCGCCACCC GGCCCGGTCC ACTGGCCACA CCGGAGAGCT GCACCGCCAT GCTCGAACTC
CTCGTCGCTC AGGAACACCG CGAGGATCTC GCCGTCGGCC TGCCCGTCGG CGCCCGGATC
GCCCACAAGA ACGGCTGGGT ACGTGGTGTG CGGCACAGCG TTGGGGTCGT CTATCCCGAC
GACGCGCCCC CGTACGTCCT CGCCGTCTGC ACCACCAACG ACGACCCCGA CCACAGCCCG
GACGAGGACG CCTGTCAGCT CATCGCCGAC ATCTCCGCCC GCGCCTTCGC CCGACGTCAC
CAGCTCGGCT GA
 
Protein sequence
MIFVGLDAHL DRVPGTVSAY LARLDATAPT WIRHPATTHY AASTMKVAVL VALYRALEAG 
RLASDTAVPV RNEFDSAQPG AARFGCTRPV HNDDDVWDRL GGTAPLRWLA ERMIVRSSNL
ATNLLLDQVG LPAVADVWAR AGARHSVTGR GIEDFAARAG GITNLITAAD LAALLRDLAL
GATRPGPLAT PESCTAMLEL LVAQEHREDL AVGLPVGARI AHKNGWVRGV RHSVGVVYPD
DAPPYVLAVC TTNDDPDHSP DEDACQLIAD ISARAFARRH QLG