Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3133 |
Symbol | |
ID | 5059597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3595558 |
End bp | 3596409 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640475380 |
Product | beta-lactamase |
Protein accession | YP_001159945 |
Protein GI | 145595648 |
COG category | [V] Defense mechanisms |
COG ID | [COG2367] Beta-lactamase class A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCTTCG TCGGTCTCGA CGCGCACCTC GACCGGGTGC CCGGCACCGT CTCGGCCTAC CTGGCCCGCC TCGACGCCAC CGCCCCCACC TGGATCCGGC ACCCGGCCAC CACCCACTAT GCGGCCAGCA CGATGAAGGT GGCGGTGCTG GTGGCGCTGT ACCGCGCTCT GGAGGCCGGG CGCCTCGCTT CGGACACCGC CGTACCGGTG CGCAACGAGT TCGACTCGGC CCAGCCCGGC GCGGCCCGGT TCGGCTGCAC CCGCCCCGTC CACAACGACG ACGACGTCTG GGACCGGCTC GGCGGCACCG CCCCGCTACG CTGGCTGGCC GAACGCATGA TTGTCCGATC CAGCAACCTC GCCACCAACC TGCTTCTGGA CCAGGTCGGC CTGCCGGCCG TCGCCGACGT CTGGGCCCGG GCCGGGGCCC GGCACAGTGT CACCGGCCGC GGTATTGAGG ACTTCGCCGC CCGTGCGGGC GGCATCACCA ACCTGATCAC CGCCGCCGAC CTCGCCGCCC TCCTGCGCGA CCTGGCGCTC GGCGCCACCC GGCCCGGTCC ACTGGCCACA CCGGAGAGCT GCACCGCCAT GCTCGAACTC CTCGTCGCTC AGGAACACCG CGAGGATCTC GCCGTCGGCC TGCCCGTCGG CGCCCGGATC GCCCACAAGA ACGGCTGGGT ACGTGGTGTG CGGCACAGCG TTGGGGTCGT CTATCCCGAC GACGCGCCCC CGTACGTCCT CGCCGTCTGC ACCACCAACG ACGACCCCGA CCACAGCCCG GACGAGGACG CCTGTCAGCT CATCGCCGAC ATCTCCGCCC GCGCCTTCGC CCGACGTCAC CAGCTCGGCT GA
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Protein sequence | MIFVGLDAHL DRVPGTVSAY LARLDATAPT WIRHPATTHY AASTMKVAVL VALYRALEAG RLASDTAVPV RNEFDSAQPG AARFGCTRPV HNDDDVWDRL GGTAPLRWLA ERMIVRSSNL ATNLLLDQVG LPAVADVWAR AGARHSVTGR GIEDFAARAG GITNLITAAD LAALLRDLAL GATRPGPLAT PESCTAMLEL LVAQEHREDL AVGLPVGARI AHKNGWVRGV RHSVGVVYPD DAPPYVLAVC TTNDDPDHSP DEDACQLIAD ISARAFARRH QLG
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