Gene Strop_3081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3081 
Symbol 
ID5059545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3531971 
End bp3532315 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content69% 
IMG OID640475331 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001159896 
Protein GI145595599 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0978825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.175913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCA TCTGCTCCGC CGAGGACGTG CCGAAGGGCA GCGTGGTCAG TGCGGACGTT 
GACGGTGTGA GGATCGCGAT CGTGCACGGC GAGGACGGTG CCTTCTACGC CGTTTACGAC
GAGTGCTCGC ACGCCGCGGT GGCCCTCTCC GAGGGGGAGG TCGAGGGCTG CACCCTGGAG
TGCTGGCTGC ACGGTTCGCG GTTCGACCTG CGCACCGGTG AGCCGACCGG GCTACCCGCC
ACCGAACCCG TCCCCGTCTA CCCCGTCGAG ATCCGCGACG GCGACATCTA CATCCCAGTG
GGCGCCGACG GCCGCCCCAT GCCGAGCAAC GGAGTGACCC GATAA
 
Protein sequence
MIRICSAEDV PKGSVVSADV DGVRIAIVHG EDGAFYAVYD ECSHAAVALS EGEVEGCTLE 
CWLHGSRFDL RTGEPTGLPA TEPVPVYPVE IRDGDIYIPV GADGRPMPSN GVTR