| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3041 |
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| Symbol | |
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| ID | 5059505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3472079 |
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| End bp | 3474751 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640475291 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_001159856 |
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| Protein GI | 145595559 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGCG CCGACCAGAT GGACGACAGT CCAGCAGGCA GAGCGCTGCA CCTCGTCACC
GACGACCCGG CTCGCGCCGC CGAGTTGGCC GATGCCGCAC TCGCCGCTGC CCGTGCCGGT
GCGGATCCGG ACGAGGAGAC CGTGGCGCTG CGGGCGCTCG GTCTCGCCGC GCGGGAGCAA
CACAACGCAG ACCACGGGCT ACGCCATCTG CGCCGGGCAC GCCGCGTGGC CGAGGCGGCC
AAGCTCCCGG CCCGCGCCGC CGAAGCCCGG ATGAGCCTGG CGCTGGTCCT GGCCGAGGCC
GGCCAACCGC AACAGGCGCT GCGGGAGATC GATGCCGCGT CACCGGCACT TCGTGGGCTG
CCCGCCGCGC GCCTACAGAT GCAGCGGGCG CTGATCCTCG ATCGCCTCGG CCGCTCCGAC
GAGGCGATGG CCGGCTACAC CGACGCGCTG GCCGCGTTCC GACGGAGCGG GGACCAGCTG
TGGCAGTCCC GCGCACTCAC CAACAGAGGG GTCCTGCACA CCTACCGGGG TAGCCTGCGC
CAGGCCGAGG CTGACCTGCG GGCGGCGGAG CAGGGCTACG CGGAGCTCGG CCAGGAGCTG
GCTCTCGCCC AGGTCCGCCA CAACCTTGGC TTCGTACTAT CTCGCGCGGG CGACATTCCC
GGCGCACTGC GCTGGTATGA CCTGGCCGAC CAGTACTTCG CCCAGACCAC CCGCCCGGCG
ATCGCCCTGA TGGATCGGGG CGAGCTACTA CTGGGCGCCC GGCTACTGCC GGAGGCTCGT
GCGGCGGCCG AGGCTGCCCT GGACGCGGCC CGGGCAAGCC GAATGGGGCT CTACGAGGCA
CAGGCCCGGC TGATGCTGGC CGAAGTCGCG CTGGCCGAGG TCGATCTGCC GACCGCCTCG
AAGCAGGCGC AGGCCGCGTA CCGCCTGTTC AGTCGACAGA ACCGACCGGC GTGGGCAGCG
CTCTCCCGAT ACGTCAAGCT ACGGGCCAGC TCGCCGGACG AACCGGCGCA CCTGCGGCAG
GCACGCTCGG TGGCACGTGC ACTGGCAACG AGTAGCTGGC CGATACCCGC ACTCGACGCG
CGTCTCTACG CCGCCCGAGT CGCCCTGGAC CGGGCGCTTC GTACCGGGCA ACGCGCCAAG
GCCGCAGCCA TCGCCGGCGA GTTGAGTGCC ATTCGAGCCG CCAGCCGAGG CGGACCGGCC
CAGCTCCGGG CCCGCGCCTG GCATGCCGAG GCACTCCGAC GAATCGCCAC TGGCGATATC
GCCGGGGCGC GCCGGGCCCT CAATGCGGGA ATGGCCCTGC TGGACCGCTA CCAGGCAGCC
CTCGGCGCCA CAGAGCTGCG GGTGATGGCC GGGGCATACG CCCTGGACCT GGCCAGCACC
GGCCTTCGAC TCGCGGTTCG TGGCGGTCAG GCTCGGGCGA TCCTACGCTG GAGTGAGCGT
TGGCGGGCCG CCGCGCTGCG GTTGCCCCCC GCCCGACCGC CGGACGAAGC CGGGCTTGCT
GCCGACCTGG CCGAGTTGCG CCGCACCGTG GACGAATCCG CCCAGGCGAG TGCCGCGTTG
GGGTTAACCC TGTTGCGTCG ACAGCGGACG ATCGAGGAAC GAATCCGCAC CCGTAGTTGG
CAGGCCAGCG GCACCGAGTC GGGTTCGGCG AGCGGGATAT CGCTGGACCG GATCGCGATG
GAACTGGCTG ACCAGACGCT GGTCGAGCTG GTCGACATTG ACCGGACGCT ACACGCCGTC
GTGGTGCACG GCGGCCGGTT TCACACCCGG GCGCTCGGTG CGCTCGCCGC CGTCACGGAC
GAGCTCCAAG CCCTGCGTTT TGCGCTACGA CGCATCCTGA CCAGCCGCGG CACCGACGAC
TCCCGGGCGG CGGCGGCGAC CGCGGCCCGA TTCGCGGTAC ACCAGCTGGA CGACATGATC
TTCGGTGCGA TACAGCCCTG GCTCGGCGCT GGCGGACTGG TCCTGGTACC GGTCGGCGCA
CTGCACGCCA TGCCCTGGGC GCTACTCCCG ACCTGCGCCG GGCGACCGGT CACGGTGGTG
CCATCGGCCT CCGAGTGGCT CACTGCATCG GCCCGCCGCC AGGCCTCCCA CCCCACGATG
ACCACTCCGC CCCACCAGCG GAACCCGGTG CTGGTAGCCG GGCCCGGCCT CGCCTACGCC
GAAGCGGAGG TGCAGCGGTT GGCGGGGGCA CTCGCTCCCG TCCAGGTGCT CCTCGGCTCC
GACGCGACCG CCGAGGCAGC GCTCGCGGCG CTGGATGGTG CTCCCCTTGC CCACCTCGCC
GCACACGGCA CGTTCCGCAC CGACAATCCC ATGTTCTCGC ACGTACGCCT CGCCGACGGC
CCCCTGACCG TCTACGACCT GGAACGACTC GCCTGCGCGC CTGGCACGGT GGTGCTCTCC
GCCTGCGACG TGGGGTTGTC AGCGGTGCAT CCGGGCGAGG AGTTGATGGG ACTGTCGGCC
GCGCTGCTTC AGCTGGGAAC GGCGACGGTG CTGGCCAGTG TCCTGCCGGC ACTGGACTCC
GCAGCGCAGG AGCTGATGGT GGAGATGCAT CGACGGCTGG CCACCGGCGA CACACCGGGG
CTCGCCCTCG CCGGCGCACA GGCGGAGTTC GGTACTGGCC TGGACGCCGG CACCGCAACC
GCCGCCTCGT TTGTCTGCTT CGGCGCCGGC TGA
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| Protein sequence | MGSADQMDDS PAGRALHLVT DDPARAAELA DAALAAARAG ADPDEETVAL RALGLAAREQ
HNADHGLRHL RRARRVAEAA KLPARAAEAR MSLALVLAEA GQPQQALREI DAASPALRGL
PAARLQMQRA LILDRLGRSD EAMAGYTDAL AAFRRSGDQL WQSRALTNRG VLHTYRGSLR
QAEADLRAAE QGYAELGQEL ALAQVRHNLG FVLSRAGDIP GALRWYDLAD QYFAQTTRPA
IALMDRGELL LGARLLPEAR AAAEAALDAA RASRMGLYEA QARLMLAEVA LAEVDLPTAS
KQAQAAYRLF SRQNRPAWAA LSRYVKLRAS SPDEPAHLRQ ARSVARALAT SSWPIPALDA
RLYAARVALD RALRTGQRAK AAAIAGELSA IRAASRGGPA QLRARAWHAE ALRRIATGDI
AGARRALNAG MALLDRYQAA LGATELRVMA GAYALDLAST GLRLAVRGGQ ARAILRWSER
WRAAALRLPP ARPPDEAGLA ADLAELRRTV DESAQASAAL GLTLLRRQRT IEERIRTRSW
QASGTESGSA SGISLDRIAM ELADQTLVEL VDIDRTLHAV VVHGGRFHTR ALGALAAVTD
ELQALRFALR RILTSRGTDD SRAAAATAAR FAVHQLDDMI FGAIQPWLGA GGLVLVPVGA
LHAMPWALLP TCAGRPVTVV PSASEWLTAS ARRQASHPTM TTPPHQRNPV LVAGPGLAYA
EAEVQRLAGA LAPVQVLLGS DATAEAALAA LDGAPLAHLA AHGTFRTDNP MFSHVRLADG
PLTVYDLERL ACAPGTVVLS ACDVGLSAVH PGEELMGLSA ALLQLGTATV LASVLPALDS
AAQELMVEMH RRLATGDTPG LALAGAQAEF GTGLDAGTAT AASFVCFGAG
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