Gene Strop_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3023 
SymbolhemH 
ID5059487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3454948 
End bp3456030 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content72% 
IMG OID640475273 
Productferrochelatase 
Protein accessionYP_001159838 
Protein GI145595541 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.717829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.96157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCGGG GCCGTCGTCA GGTCGCCGAG GCATCGGGGA AGAATGGGGC CATGGCGTAC 
GACGCGATGG TGCTGGTTTC TTTCGGTGGG CCGGAGCGGC CCGAGGACGT GATGCCGTTT
CTGCAGAACG TGACCCGGGG CCGGGGCGTG CCGCCGGAGC GGCTGGCCGA GGTCGCTGAG
CACTACCAGC ACTTCGGCGG GGTGTCGCCG ATCAACCAGC AGTGTCGGGA CCTGCTCGCC
GCGGTTCGGG ACGACTTCGC CGCCAACGGT GTTGACCTGC CGATTTACTG GGGAAACCGG
AACTGGGACC CGATGCTGGC CGACACGGTG GCGCAGATGC GCGACGACGG GGTCGAGCGG
GCCCTGGCCT TCGTGACCAG CGCCCTCGGC GGATACTCCT CCTGCCGCCA GTACCAGGAG
GACATCGCCG CGGCCCGGGC GGCGGTCGGC CCGGACGCCC CGGTGATCGA GAAGCTGCGC
CAGTTCTGGG ACCACCCCGG GTTCGTCGAG CCGCACGTCG ATGCGGTGCG GACGGCGTTG
GCCCAGCTGG ACCCGGCCCG GCGGGACAGC ACCCGAATCG TCTTCACCGC TCACTCGATT
CCCACCTCCG CGGCGGCCGC GGCCGGCCCA CACGGCGGCC GGTACGAGGC GCAGTTGGCG
GAGACCGCTC GGTTGGTACA CGCCGCTGCC GCCCCCGACC TGGCCTACGA CCTGGTGTGG
CAGAGTCGTT CCGGGCCCCC ACAGGTACCC TGGCTGGAGC CGGACGTCAA CGACCACCTC
GTGGAGTTGC CCGGGCAGGG GGTCACCGGG GTGGTGGTCA GCCCGATCGG GTTCGTCTCC
GACCACCTGG AGGTGGTGTG GGATCTGGAC ACCGAAGCCC GGGAGACCGC CAAGCAGCTC
GGTCTGGACT TCGCTCGCGC CGCCACGCCG GGCACCGATC CACGGTTCGT GGCGATGGTG
CGCGAACTGG TCCGGGAGCG TACCGATCCG GCTGGCGCGA CGCTGCGCCG GCGCCTCGGC
GACCTGCCGA TGTGGGACAC CTGCCCGACG GACTGCTGCG TCCCGGCCCG CCGCCCCTCC
TGA
 
Protein sequence
MARGRRQVAE ASGKNGAMAY DAMVLVSFGG PERPEDVMPF LQNVTRGRGV PPERLAEVAE 
HYQHFGGVSP INQQCRDLLA AVRDDFAANG VDLPIYWGNR NWDPMLADTV AQMRDDGVER
ALAFVTSALG GYSSCRQYQE DIAAARAAVG PDAPVIEKLR QFWDHPGFVE PHVDAVRTAL
AQLDPARRDS TRIVFTAHSI PTSAAAAAGP HGGRYEAQLA ETARLVHAAA APDLAYDLVW
QSRSGPPQVP WLEPDVNDHL VELPGQGVTG VVVSPIGFVS DHLEVVWDLD TEARETAKQL
GLDFARAATP GTDPRFVAMV RELVRERTDP AGATLRRRLG DLPMWDTCPT DCCVPARRPS