| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2971 |
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| Symbol | |
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| ID | 5059435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3400348 |
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| End bp | 3401685 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640475222 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001159787 |
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| Protein GI | 145595490 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.828936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGGCG GCGGGCGACC GCGGCGCAGG CTGACGTTGG TCGCGGCCGC CGCGGGTATC
TTCCTGGTGC AGTTGGATTT CTATGCGTTG AATCTGGCGT TGCCGTCGAT GGCGGCGGAG
TTCGGTTCCT CCACCACGGA TTTGCAGTGG GTGATCAGCG GCTACATCCT GGCCCAGGCG
GCGTTTCTCA TCCCGGGTGG CAAGCTCGGT GACATCCTTG GTCGTCGGCG CATGCTTGTC
GTGGGTTTGG TGATTTTCGG GGTGGGGTCG CTTGGTGCGG GTCTGGGCCC TGATCCGCCG
ATCGTGATTG CCTTTCGGGT TGTGCAGGGA ACGGGAGCCG GGATCGTGTT CCCGCTTGCC
TTGGCGGTGA TTACCGAGGC GTTCCCGGGG CGGCGGGCGA AGCGGGCGAT CGGTAGCGCG
TACGGCATCG GGGCGGTGGC GCTGGCGATG GGGCCGTTGC TCGGTGGCGG GGTAACGGAG
TTGATCAGCT GGCGAAGCGT GTTCCTGGTG AACGTGCCGT TCTGCCTTGT GGCGATCGTG
GCCGCCCTCG CCTGGGTTCC GGAGTCGCGT GACCCCACGG TGTCGCGTCG GATCGACCTG
GCGGGTCTGG TCGTGGTGGT GCTGGGGATT GTGGCGATCA CCGTGGCGGC GGACCGGATG
AGTGCCTGGC GACCGGTGGT GGCCGCTGGC CTCGCTGTCG GTGGGCTGGT GCTGCTGGCC
GCGTTCGTGC TTCGGGAGCG GGTGGCCGAG AGTCCACTGG TCCGGCTGGA TCTATTCAGA
AACGCCAAGT TCGTGGTGGT GACTCTGATG GGGATGGTCG CCAACGTCTC CTTCGTGGTC
ACGATCTTCG CCACGACCAT CTACCTGCAG CAGGTTCGGG GCTACTCGCC GTTCGTCGCG
GGCCTGGCGG TCCTCACCGC CTCGATTGGC GGCGGCGTGG CCGGTCCGTT CGCGGGTTGG
CTCAGCCAAC GGGTCGCGGT GCGTCGGTTG ATCGCCGCCG CCATCCTGGT CGGCGCGGTC
GGTCTGGTCG TGGTGGCCTT GGGTGGGCAG ATCGGGCTGT ATCTGCTCGG TCTGGCGGTC
GCCGGGTTCG GCTACCGGAT CGGGTTCACC CTGACCAACC TGGGCACGCA GGCCATAGTC
CCGGCCGAGC GGGCCGGCGA GGCATCCGGG GTGACGCTCT CGATCCTCCG TGCCGGTTCG
GGTATCGCGG TCGCGGCGGC CGGCACGCTG ATCGAGCAGG GCGACCTCGC CACCGGCATC
ACGCGGGTTC TCCTGGGGAT CGCAGTCGGG AGTGCCGTGG CCGCTCTTGT CCTGTCCAGG
ATGTTCCGGG CTGGCTGA
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| Protein sequence | MGGGGRPRRR LTLVAAAAGI FLVQLDFYAL NLALPSMAAE FGSSTTDLQW VISGYILAQA
AFLIPGGKLG DILGRRRMLV VGLVIFGVGS LGAGLGPDPP IVIAFRVVQG TGAGIVFPLA
LAVITEAFPG RRAKRAIGSA YGIGAVALAM GPLLGGGVTE LISWRSVFLV NVPFCLVAIV
AALAWVPESR DPTVSRRIDL AGLVVVVLGI VAITVAADRM SAWRPVVAAG LAVGGLVLLA
AFVLRERVAE SPLVRLDLFR NAKFVVVTLM GMVANVSFVV TIFATTIYLQ QVRGYSPFVA
GLAVLTASIG GGVAGPFAGW LSQRVAVRRL IAAAILVGAV GLVVVALGGQ IGLYLLGLAV
AGFGYRIGFT LTNLGTQAIV PAERAGEASG VTLSILRAGS GIAVAAAGTL IEQGDLATGI
TRVLLGIAVG SAVAALVLSR MFRAG
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