Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2941 |
Symbol | |
ID | 5059405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3362389 |
End bp | 3363252 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640475192 |
Product | transposase, IS4 family protein |
Protein accession | YP_001159757 |
Protein GI | 145595460 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00010535 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC GGCGCCCCTA CCCGTCCGAC CTGTCCGACG CCCGCTGGGC CCTGATCGCA CCCCGCCTAA CCGCCTGGCG GCAAGCCCGC ACCGACGCCG GCGTCAGCGG ACGTACCCCC ACCCACGACC TGCGCGACAT CTTCAACGCC ATCCTCTACA TCAACCGCAC CGGCATCGCC TGGCGCTACC TACCCCACGA CTTCCCGCCC TACCGCACCG TCTACGGCTA CTTCGCCGCC TGGAGCAAAG AAGGCATCTT CACCGAACTC AACTACCAGC TCACCGGCCT CGTCCGCGAC CACCACGGCC GCACCACCGA ACCCACCGCA TCCATCATGG ACAGCCAGAG CGTGAAGACC TCCACCAACG TCCCACTATC CACACAGGGC ACCGACGCCG GAAAGAAAGT CGTCGGCCGC AAACGCGGCA TCCTCACCGA CACCCTCGGC CTCCTCCTCG CCGTCACCGT CACCGCCGCA AGCGCCAGCG ACAACACCAT CGGCATCAAC CTGCTCAACC AGGCCACCAC CACCCACCCC ACCCTCACCA AAACCTGGGT CGACGCCGGC TTCAAAAACC GCGTCGTCGA ACACGGCGCC GCACTCGGCG TCGACGTCGA GACCGTCACC AAAGACCCCC AGGCCAAAGG CTTCAGCGTG GTCAAACGGC GATGGGTCGT CGAACGCACC ATCGGCTGGC TCATGCACCA CCGCCGACTC GTCCGCGACT ACGAAGCACG ACCCGACAAC TCCGCCAGCA TGATCACCAT CGCCATGATC GACAACCTCG CCAAACGCCT CACCACCGAA ACCACCCCAA CCTGGCGAGA ACCCCTACAA CCCCAACACA CACAAAATAC GTGA
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Protein sequence | MTERRPYPSD LSDARWALIA PRLTAWRQAR TDAGVSGRTP THDLRDIFNA ILYINRTGIA WRYLPHDFPP YRTVYGYFAA WSKEGIFTEL NYQLTGLVRD HHGRTTEPTA SIMDSQSVKT STNVPLSTQG TDAGKKVVGR KRGILTDTLG LLLAVTVTAA SASDNTIGIN LLNQATTTHP TLTKTWVDAG FKNRVVEHGA ALGVDVETVT KDPQAKGFSV VKRRWVVERT IGWLMHHRRL VRDYEARPDN SASMITIAMI DNLAKRLTTE TTPTWREPLQ PQHTQNT
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