Gene Strop_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2887 
Symbol 
ID5059350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3305292 
End bp3306074 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID640475139 
Producthypothetical protein 
Protein accessionYP_001159705 
Protein GI145595408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.421477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGCGT ACGGGACGCC GGAACGGATG AAAGCAGCGA AGCCGGTGGC CGCCCAGATC 
TCACAGAGCA TGACTTACGC TCCGTCGCCG GTGACGATCT TCTCGATCAC CAATGGCAAG
CTGTTCAACG GTGGCTACGA AAGTGGCTCG TGGTGCTCGG CGTCAGCGAT CAGCGCCTCG
TCCAAGCGGG TGCTGATCAC GGCCGGTCAC CGTGTCCATG GCGGGCAGGG CGGCACCTGG
CTGCAGAACC TCGTCTTCGT GTCGGCGTGC AACGCCTTCA ACACGACAGT CGTCAACACC
ATCGGTGGGC ACGGCCTGGT CTACAACGGT GGCACCGAGT TCGAAACGTC GATCATTGGA
TATCCGGGCA ACCATGACGG CGGCAACGTC ATGTGGGCTT GCTGGGGGAC TGCCACCGAC
AACGCTGACT GGTGGGTTGA ACTGATGAGA ATGCGGCCAC CGCTTCCACT GGCTGCCGGG
TTGCTGGCGG TGGTGGCCGT CAGCGCCTGC GGCTCCGTAG CCGAGCCCGA CAGCGACACC
TCGGGTATCC GAGCGCCGAC CGGACCGACG GGGCCGGAGG TGTTGCCGAC CCGGAGCGAC
CTGATCGACG CGCAGGTTGT TCAGTGGCGT GATTGGCGCA GTGTCGACGA TCGAACGGTC
TGGCGGAGCG CGGGAAGGCC AGGTGAGGTG GCTCCGGTCG GACGAGATGT GGCACAGTCC
GATGGTGTCC GCGCCCACCA TCCTCCTCGC GGAGGACGAT CCCGCCATCC GTCGCGCCGT
TGA
 
Protein sequence
MLAYGTPERM KAAKPVAAQI SQSMTYAPSP VTIFSITNGK LFNGGYESGS WCSASAISAS 
SKRVLITAGH RVHGGQGGTW LQNLVFVSAC NAFNTTVVNT IGGHGLVYNG GTEFETSIIG
YPGNHDGGNV MWACWGTATD NADWWVELMR MRPPLPLAAG LLAVVAVSAC GSVAEPDSDT
SGIRAPTGPT GPEVLPTRSD LIDAQVVQWR DWRSVDDRTV WRSAGRPGEV APVGRDVAQS
DGVRAHHPPR GGRSRHPSRR