| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2838 |
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| Symbol | |
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| ID | 5059301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3254276 |
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| End bp | 3255085 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640475091 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001159657 |
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| Protein GI | 145595360 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.490392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGC TGTTCTCGGT AGCGGGAAAG ACCGCCCTCG TCACGGGCGG CACCCAGGGG
ATCGGGAGAA TGATCGCGCG GGGTCTCGCC TCGGCTGGGG TCCGGGTCTA CCTCACCGCC
CGAACCAAAT CCGACTGTGC GGACGTCGCC CAGGAGCTCA CCGCCCTCGG TGGCGAGTGC
GTGGCGATCC CGGCTGACCT GTCCGAGGAA CAGGAGTGCG CCCGGCTGGC CCGCGAGATC
GCCGAGCGCG AGGAGCGATT GCACATCCTG GTCAACAACG CTGGCACCGC GTGGACCGCC
CCGGTCGACC AGTTCCCCGC CGCCGCGTGG GACAGCGTGC TGGACATCAG CCTGAAGGCG
CCACTGTTCC TGGTACGCGA GCTGGCGCCG CTGTTGCGTG CAGCCGGCAC CGCCGACGAT
CCGGCCCGGA TCGTCAACAT CGGCAGCGCC GACGCCCAGC GGGTGCCCGA GATGCCGACC
TACTCGGCCG CCGCGGCGAA GGCGGCCATC CACCACATCA CCCGGATGTT GGCCCACGAC
TTCGCTCCCA CGGTGACCGC GAACGTGATC GCCCCTGGCA GCTTTCCCTC CCGGATGATG
GCTGGTGTGC TCGAGGCCAT CGGCGAGGAG ATCGCCGCGG TCACGCCGTT GCAGCGCATC
GGCCGGCCGG AGGACATCGT CGGTACGGTC ATCTACCTGT GCAGCCGGGC CGGCTCCTAC
GTCACCGGCT CGGTGGTCAC GGTCGACGGT GGTCTCTCCA CCGCACGGAC CGGGTACGTG
CCGGGCCGGT TCCTCACCGA CGAGCAGTGA
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| Protein sequence | MSELFSVAGK TALVTGGTQG IGRMIARGLA SAGVRVYLTA RTKSDCADVA QELTALGGEC
VAIPADLSEE QECARLAREI AEREERLHIL VNNAGTAWTA PVDQFPAAAW DSVLDISLKA
PLFLVRELAP LLRAAGTADD PARIVNIGSA DAQRVPEMPT YSAAAAKAAI HHITRMLAHD
FAPTVTANVI APGSFPSRMM AGVLEAIGEE IAAVTPLQRI GRPEDIVGTV IYLCSRAGSY
VTGSVVTVDG GLSTARTGYV PGRFLTDEQ
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