Gene Strop_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2812 
Symbol 
ID5059275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3215729 
End bp3217105 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content70% 
IMG OID640475065 
Producthypothetical protein 
Protein accessionYP_001159631 
Protein GI145595334 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTGA ACGTGTTCAC CCAGTGCTCT CCGGCACCCC AGTTCAAGGG CATGTGGAGG 
GTCCCGGGCG ACCGGACGGC GACCGGATAC CGTTCGCTGG AGTACTGGAC AGCGCGGGCC
CGGCAGCTGG AAGCGGCCTG CGTCGACGCG CTCTTCTTCG CGGACATCCA CGGCGTCTAC
GACGTGTACC GAGGGTCCTG GGCCCCGGCG GTACGGCACG CGGTGCAGAT TCCCTCGATC
GACCCGGCTC TGCTCCTGCC CGCGCTCGCA GCCACCACGC GGCACCTCGG CTTCGCAGTT
ACCTACTCCA CCACCTACCA CCCCCCGTTC GAGTGCGCCC GGCTCTTTTC CTCGCTGGAC
CACCTGACCG GCGGCCGGGT CGGTTGGAAC ATCGTCACCT CCTACCTGCG CTCGGCCACC
GCCAACGGCC TCGGCGACTA CCTGGACCAC GACGAGCGCT ACGACCGCGC CGACGAGTAC
GTGCGGGTGA CCCGGGCCCT CTGGGAGGAA AGCTGGGATG CCGATGCGGT GGTGCGGGAC
GCCGGGCGCG ACACCTTCAC CGACCCGACC CGGGTCCACG AGATCGACCA TCACGGCCGG
TGGTTCTCGG TACGTGGTCC GCACCAGTGC GAACCGTCAC CCCAACGCAC CCCGGTGCTC
TACCAGGCCG GCTCGTCGCC GCGAGGGATC GAGTTCGCCG CCCGGCACGC CGAGGTGGTC
TTCCTGACCC TGGCCGATCC CACCACGGGC GCCGAGCCGG TGGCCGACCT GCGCGCCACC
GCCGCCCGGC ACGGCCGGGA CCCACGCGCG GTGAAGGCGT TGCAGGGAAC CATGGTGATG
GTCGGCCGGG ATCGCGCGGA GGCGAAGGCT CGGGCCGAGG CGTACAACAC GCTCTGGAGC
AGCGAGGGGC AGCTGGCCAA GTGGTGCGGC TGGATGGACA TCGACCTCTC CGCCTTCCCC
GACGACACCC CGGTCGACGA GATCCGCAGC CAGGCCAGCC ATTCTTTCCT CGGCTTCCTT
CGCAGGCTGA CCCCGGACCG CACCTGGACG GTGGGCGACG TGAAGTACCT CGTCTCCCGA
CCCCGTCGGC CCCGGGTCGA TGCCCCGGTG ACCCTGTTCG GCACTCCTGA GCAGGTCGCC
GACCGGATGG AACAGTGGCT CGAGGTCGCC GACGTGGACG GGTTCAACCT CATCCCGTGC
CCCCCGTCGG GCGGGGTGGA CGACATCTGC GACCTGCTGA TCCCCGAGCT GCAACGACGG
GGCCTGTTCC GCACCGCCTA CGACCCGCTG GAGAGCACCC TGCGGGAACG GTACTTCGGC
CCCGGTAACC GCACCTACTC CGACCCGGCC CGTGCCGGGG CCATCCGGGA AGGCTGA
 
Protein sequence
MHLNVFTQCS PAPQFKGMWR VPGDRTATGY RSLEYWTARA RQLEAACVDA LFFADIHGVY 
DVYRGSWAPA VRHAVQIPSI DPALLLPALA ATTRHLGFAV TYSTTYHPPF ECARLFSSLD
HLTGGRVGWN IVTSYLRSAT ANGLGDYLDH DERYDRADEY VRVTRALWEE SWDADAVVRD
AGRDTFTDPT RVHEIDHHGR WFSVRGPHQC EPSPQRTPVL YQAGSSPRGI EFAARHAEVV
FLTLADPTTG AEPVADLRAT AARHGRDPRA VKALQGTMVM VGRDRAEAKA RAEAYNTLWS
SEGQLAKWCG WMDIDLSAFP DDTPVDEIRS QASHSFLGFL RRLTPDRTWT VGDVKYLVSR
PRRPRVDAPV TLFGTPEQVA DRMEQWLEVA DVDGFNLIPC PPSGGVDDIC DLLIPELQRR
GLFRTAYDPL ESTLRERYFG PGNRTYSDPA RAGAIREG