| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2728 |
|---|
| Symbol | |
|---|
| ID | 5059191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3074043 |
|---|
| End bp | 3074945 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640474984 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159550 |
|---|
| Protein GI | 145595253 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4122] Predicted O-methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00309859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.614754 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC TCTCCGGAGC CCGAGGTGTT GACGAGTCAG GCGAACGCGT CCCGGGTGGG
CCAAACTCAG ATCACACGTT CAGAGCTGCC CTCGACCGGT TGCGGGTACC CGGCATGGGA
ACCGAGGTCG TGGCACCGCT GCTGTCGAAC CTCATTCACA TGGTCCGTCC GACGCGGGTG
CTTGAAGTCG GCATGGGGTA CACCACGTTG TTCCTGGCCA GGGCACTGGC TGAGGTCGAC
CGGGCGATCG AAGACGAGAG ACAGGCCTTG GTCGAAAAGA CCGAGCCGTA CCTACGTGAC
GGGCGCGATC TCGACGAGAA GTGGATCGAG ACGACACCCG CGCTCCTGGT TCCCGGTTTC
TACAACAGGC GCAGGGCAAC CAGGTTCATC GCTGTCGACG ATCTGTCCGA TGAGCACTCC
TCGGCGCGAA GGGTAGGCGA AGCACTCCAC GAAGTTGGGC TCGCGGATCG GGTCACTGTT
GTCAACGGAC AGCTTCGGGA CTGCCGGGAG GCGCTACCCG AGGGTTTCGC GCCCATCGAC
TTCGCCTGGG TGGACGCCTG GGAGTGTCTC TACTTTTTCG AACACTTCTG GGATCTGATC
GACCCGGACG GCGGCCTACT CGTCATGCAC TACCTCATGA CCTATCCCGA GGGTGAGGCT
ATCCTGGAGT ACATTGCAGA CTCCCAACGG CTTCGCGCGG GTGAATTCGA GGTGCTGAGC
CTTCTCGAGG GCCAAAAACT GCGGCAAAAC AGCCTGACCG TGATCCGCAA GACCGCCGGC
ACCAAACCCA AAACGTACGC TGAGCAGGGG CAGGTTTTCC CGATGGACGG CAGGTTCCGA
GAAGAGGCGA ACACCCTGCT CGAGAACGCC CGTGGCCACC GTTTGCGCGG TTCGGACAGA
TAG
|
|---|
| Protein sequence | MTMLSGARGV DESGERVPGG PNSDHTFRAA LDRLRVPGMG TEVVAPLLSN LIHMVRPTRV
LEVGMGYTTL FLARALAEVD RAIEDERQAL VEKTEPYLRD GRDLDEKWIE TTPALLVPGF
YNRRRATRFI AVDDLSDEHS SARRVGEALH EVGLADRVTV VNGQLRDCRE ALPEGFAPID
FAWVDAWECL YFFEHFWDLI DPDGGLLVMH YLMTYPEGEA ILEYIADSQR LRAGEFEVLS
LLEGQKLRQN SLTVIRKTAG TKPKTYAEQG QVFPMDGRFR EEANTLLENA RGHRLRGSDR
|
|---|
| |