Gene Strop_2654 details

Gene Information

• Locus tag: Strop_2654
• ID: 5059117
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora tropica CNB-440
• Kingdom: Bacteria
• Replicon accession: NC_009380
• Strand: -
• Start bp: 2980440
• End bp: 2987120
• Gene Length: 6681 bp
• Protein Length: 2226 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 640474910
• Product: beta-ketoacyl synthase
• Protein accession: YP_001159476
• Protein GI: 145595179
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism; [R] General function prediction only
• COG ID: [COG0300] Short-chain dehydrogenases of various substrate specificities; [COG3321] Polyketide synthase modules and related proteins

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.261151
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.360138
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAACACGG TCGAGAGCCC CGACTCGTCG CTGATCGCCG TCACCGCACT GGACTGCCGG 
TTTCCCGGCG CCCCCGACAC CGAAGCGTTC TGGGACCTGC TGCTCTCCGA GCGCCACGGC 
CTCACCCGGC ACACCCTCGA CGAACTTACC GAGCGCGGGG TGCCCCCGCG GTTGCGCGAG 
CACCCCGCGT ACGTCCCGGT CGGCGGCGTC ATCGACGACC AGGACCGGTT CGACCCTGAG 
CCGTTTGGTC TCACGGATAC CGAGGCCGCG CTCATGGATC CGCAGCAACG GCTGTTCCTG 
GAAGCGTGCT GGCGTGCGCT CGAAGCCGCC GGGCACGGAA ACGGGATCGG GGCCGGAGCC 
GTCGGGGTCT TCGCCGGGGC GGCGCACAGC GACTACTTGA TGCGCAACCT GGCCCACCGG 
TACACCTCGG CCGCCAGCGA TCCGGTCGGG AGCCTCCAGA CGGCGATGGC GACCGTCGGG 
GACTACCTTC CGCTTCAGGT GGCACACCGT CTCGGGCTGA CAGGGCCGGC GATCGCCGTC 
AACACCACCT GCTCCACCTC ACTGGTCGCC GTGCATCTGG CGGCCCAGTC GTTGCTGGCC 
GGCGAGTGTG ACACCGCGCT GGCCGGGGGC GCGTCACTGA TCGTGCCCCA GGGTCTTGGG 
TACCTGTACG TCCCGGACGG GATCTTCTCC ATCGATGGTC TGGTACGTGC ATTCTCCGCC 
GACGGCACCG GAATCGTGCA CTCCCAGGGC GTCGGCGTCG CGGTCCTGCG TCGACTCGCC 
GACGCCCGCG CCGACGGCGA CCCGGTGCTG GCGGTGCTGC ATGGCTCGGC GGTCAACAAC 
GACGGCGCGG ACAAGACCGG CTTCACCGCA CCGTCCCCAC GTGGCCAGGC GCGGGTGATC 
ACCGAGGCGT TGGCCGTGGC CGGCGTGGAG GCGCGACAGA TCAGCTACGT CGAGGCGCAC 
GGCACCGCCA CCCGCCTCGG CGACGTTGTG GAGATCAGCG CGCTGCGCCG CGTATTCGGT 
TCCGCGGGTC CGGCCTGGTG CGCCCTGGGT TCAGTGAAGA GCAACATCGG GCACGCCAAC 
TCGGCCGCCG GCATCGCCGG TTTCGCCAAG ACCGTGCTCG CGCTGCACCA CGGGGTTCTT 
CCAGCCACCC TCGACGCCGA ACCGCTCAAC CCGGAGCTTC ACCTGGACGA CTCCCCGTTC 
ACCGTCGCAC GACGGACTGC CGACTGGCCC GGGACGCGGT ACGCGGGCGT GAGCTCGTTC 
GGCATCGGAG GTACGAACTG TCACATCGTG CTCGGCAGCG CACCGGCCGT GTCGACACCC 
GAACCCGACC CGCGTCCCCA GCTGGTGCTG CTCTCCGCCA CCAGCGACGC CGCCCTGGCC 
GAGAGTGTCA CCGACGTTGC CGACACGGTC CACACCACGA CGGTGGCGCC GGCCGACCTC 
GCGTACACCC TGCACAGCGG ACGACCGATC AGGCGGCACC GCGTCGCGGC GGTCGTCACC 
GGTGACCGTG TCGGCGACAG CGTTGCCCTG CGCACCGCCG TGCGCCGCGC GGCGGGCGCG 
AGTATGCCCA AGGTCGTTTT CGTGTTCCCC GGCGCCGGCA CCCAGTATCC CGGCATGGGC 
CGTGGGCTCA TGGCCGACGA GCCGGAGTTC GCCGACACCG TACGGGAATG CGGGGCTCTG 
TTCGACGAAC CCGGCCGGCC GCGGCTGACC GAGTTGATCG AGGCCGACCG CGCCGACCCG 
GCCGCGCTGC GGCTCGCCCG CGACCCGGCG TACGGCCTGC CGGCGCTGTT CACCGTGTCC 
CTGGCCACCG CCCGCGTGCT CATCCGGTGG GGCATCCGAC CGGACGTCGT GGTGGGGCAC 
AGCCTGGGCG AGTACGTCGC GGCGGTGGTG GCCGGCGCGC TGTCGGTAGC GGATGCGGCG 
GCCCTGGTGC GGGTCCGGTC CCGAGGGATG TCACGGACCG CCGGGCAGGG CGCGATGCTC 
GTTGTTGCCC TGTCCGAGAC AGAAGTCGTG ACGCTGCTGA CCGACCATCC CGACGTGGAT 
CTGGCGGCGG TTAACGCGCC CACCTCGTGC CTGGTCTCCG GAGCCGAGGA AGCGGTGGCC 
GTGCTGGAGG CACGGCTGGT CGCGAAGGGT GTCCAAACCA CGCGACTACG GCTGGACGCC 
GGTGCCCACT CGCGACTCGT CGACCCCGTT CTGCCCGAGC TCCGGGCGGC GGCCTCGGAC 
GTGGACGCCC GGACGCCGCT GGTGCCACTG GCCAGCACCC TCACCGGTGG CTTCCTCACC 
TCCGCGCCCG CCGCCGGCCA CTGGGCACCG CACCTGCGGT CCGTGGTGCG CTTCTCCGAC 
GCGCTGACCA CCGCCATCGG TGACGGCCCG GCCGTGGTCG TGCAGACCGG ACCCGGCAGC 
GGCCTGCTGC AACTCGCCCG CCAACACCCG GCGGTGCAAC TGGCGGCGAC CATCGCCACC 
TTCCCCGAGC CAGACGAGCC CGGTGACGAA CGGGCCACGC TGCTGGCCGC CACCGGTGAC 
CTTTGGACGT GGGGTGTGGG AATCAGCGCC GAGGCCCTGC ACCGGTCCGG CCGGCGGCGG 
GTGATGCTGC CCGGCCATCC CTTCGATCGG CGGCGACTGT GGATTGATCC GCCCGAACCG 
GAGGCGGTAC CGACCGCAGA CGCCCCGGAC GAGAACGAGC CCTTCCAGGT GCCGGTCTGG 
CTACGTGTAC CGATGCCGGA CGACTCGGCC GCCATTACCG GCCGTTGGCT GCTGGATGGG 
CCCGAGGGCG ACCCTCTGGT CGAGGCGATA CGTATGTACC TGGGCGCCGC TGGTGCCCAG 
GTGATCGACC GCGCCGAGGT CGCTGCCGAC GCGACGATCC CGTGCGCCGG TGTGGTCGTC 
CTTGACCTCG CCCCCGATGG CGACGACCCG GCAGCGCGGG TGACCGGGGC GGTCCTACGC 
CACGCCGAAC TGGCCCGCCT CACCGCCACC TGGGCACACG ACAGTTGCCT GCTGCATGTC 
ACCCGGGCAG CCCAGCAGGT CGAGAGCTCC GACCGACCGA ACCCGGCCAG CGCCGCCGGC 
ACGGCCGTAC CCCGCGTCCT GGCGCAGGAG TTCCCCGGGC TGCGGTGGCG CACCGTCGAT 
CTGCCGGTGG TGGGTCCGCC GGACGAGCTG GCCTGCCGGG TCGCTGAGGA GGCGGTGGAC 
CTGGTGACCG GCGACCTGAC TGGAGCGGAG GTGGCGCTAC GCGGCCGGCA CCGCTGGCTG 
CGTACCGTGA ACCCGTGGCG GCCCCGTTCG GAGGGGCCGA CGGATCGGAT GGACGCGGGT 
ACCGCCCTGC TCATTGGTGG GTTGGGCGAC GTCGGTCTGA CCATGGCCGA ACATCTGGCC 
GAGCGGGGTT GGCAGGTCGT TGTCACTGGC CGTACCGGCC TTCCGCTCAA CGCGGCACCG 
GACAGCCCGG CAGCCGCCCG GCTCGAGGCA GTCCGGCGAC TGACCGACCG CGGCCTTCCG 
GTGGAGGTAC GCGCGGTCGA CGCCGGAGAC CCCGAGGCTA CTGGTGCCCT GCTGCGCGAC 
ATCGTCGATC GTTTCGGCCG GGTGGACCTC GTGGTCCACG GTGCGGGAGT GGTCGCCTCG 
ACGGCGGTCT CTCCCCTGCG AGCGGTCGAT CCCGAAGCGG CGCGTGGCCA CGCGCGGGCC 
AAGGTGTCGG CGGCCGTCGC CCTGCGGCGG GCTCTCGTGG AACTGCCCGA GGAGGCCCGT 
CCCCACACCG TAATGCTGAT GTCGTCGGCG ACGACCCTGG TGGGCGGCCT GGGACTGGCT 
CCGTACGCTG CGGCGAACCG CTACCTGGAT GCGTTGGCGG AGCACCAGGG CACGGCGGGT 
GGCACGGTCT GGCTCAGCGT GGCCTGGGAC GGCTGGCGGG TCGGCCCGGG CGGCACCGAG 
CGGGCCGTCG CCTCTCGGCA CTCGATCGGG CGGCGGGACG GCATGCGGGC GCTGGACCGG 
TTGCGCGCCC TGACCAGCCG GGGGCGGGCC CCCGCGCTGG TCGCGGTCTC CCCCGCCGAG 
CTACGCCCCC GACTGTCCGG CGAGGCGGTC GACGCCCGGC GGCAGGTCGC GTCCGGGATG 
CGAAACGGCG TGGCCGAGAA CGGTGCCCGT GGGGACGCGG AGGCGACCCT CGCCAAGGTC 
TGGTCAGAGC TGCTCGGTTT CGACGTGTCC GACCGGGACG CCGACTTCTT CGCCCTCGGG 
GGGCACTCAC TGCTCGCCAC CCGGATGCTG GCTCGGCTCC GGGACGAGCA CGGTGTCCAA 
CTGCGCTTGC AGGATCTCTT GGCACGACCG ACCGTCGCAT CACTGGCGGC GCTCCTGCCG 
ACGGCCGACG AGTCCGACCC GACGGGCGAC ACCGGCCCGT CCGCCGGCAC GGCATCTCCG 
GCCGGCCCGG AGTTCGCGGA GGCCGGACCG AACGGGGACG GGCCACGGGA GTTTCCGCTG 
ACTCGGGTAC AGCACGCGTA CTGGGTAGGC GGCTCAGGTG GCTACCGGCT CGGTGACGTG 
CCCTGTTCGT TCCACCTGGA ACACGACTGT CCCGGGCTGG ACGTGGCCCG ATACGAGGAC 
GCGTGGAACG CCGTGATCGC CCGGCACCCG ATGCTTCGCG CGATCATCAC TCCCGAGGGC 
CGCAACCGAA TCCTCGACCG GGTGCCCCGG TACCGCATCC GGGTCCGGGA CCTCTCCGCG 
CTCGACGAAC CCGTCCGGCT GGAGAAGCTC GCCCGGATCA GGGCGGAGAT GGTGGGGCGG 
GAACCCCGTC CGGGCCGTTG GCCGCTGGTC GACATCCGCG CCGCCCGGCT GCCTGGCGGG 
ATCGTACGCC TCTTCGTCAA CGTCGATGTG CTCGTCTGCG ACACCGCCAG CTTCCTGCTC 
TGGGATCGCG AGCTGCGCGC CCTGTACGAG GATCCACACG TCGAGCTGCC ACGGGTGGGC 
ACGACCTTCG CCGCGTGCGT CGCCGCACTG GAACGGCGGG CGCACAGCCC GGAACGCGAA 
CGCGCGGCGC GCTACTGGCG CGACCGGCTT GAACGCCTGC CCGGGGCCCC CGCGCTGCCG 
GTCCGTCCGG CACAACCGGG GATCCGGCCC CGGTTCGTGC GGCGTACCGC ACGGTTGGAG 
CCGGCGCAGT GGCAGGCGCT CCGAGCGGAG GCCGCTCGGC GGAGCCTCAC TCCGACCGCC 
GTGCTGCTCG CGGCATACGG GGACGCGCTG GCGGTCTGGT CCAGGCAGGG ACGGTTCGCC 
ATCACGCTGA CCCTGTTCGA CCGTCCACCC GTGCATCCGG ACGTCAACCT CGTCGTCGGG 
GACTTCACGT CGTTGCTGCT GCACGAGGTC GACCGGTCCC GCCCCGGGAC GTTCGCCGAC 
GACGCGGGCG AAGCGCAGCG GACCCTCTTC CGTGACCTGG ACCACCGCGA GTTCTCGGCG 
CTGGAAGCGC TGGCGGAGAA GTCCGCGCGT AGCGGCGTCA CCGAGTCCGT ACCCGTGGTG 
TTCACCAGTG CGCTGGGGCT GACCGATCCG CTCGGCGGCG AGCACGACCT GGACTGGATG 
GGCAAACCTG TCTACGGCAT CAGCAGCACG CCGCAGACCT GGCTTGACCA TCAGGTGATC 
GAGCAGCACG GTGCCCTGCT TCTGCAGTGG GACGTGTTGG AGAACGTCCT GCCGGCCGAC 
GAGGCGGACG AGGCGTTCTC CGGCTACGTC GATCGGGTGC GTCGACTGGC CGGTGAGGCC 
GAGGAGTGGG ATGCCCCCAG GCCGGCAGGG CCATCCGCGG CCGGCCAGTC GGCCCCGACC 
GGTCCACCGC CCGGTGAACC AGCAAGCTCG GGCGAGACCG CGCTGCTGCT ACGCGGCGGC 
ACCGCCGAGC CCCCGCTGTT TCTGATTCAC CCGTCTGGTG GTGATGTGCT CTGCTATGGC 
GAACTCGTCG GGCTGCTGAC CGACGACCGC CCGGTGGTCG GGCTCACCGA CCCGGCCCTC 
ACCGGAGGCG TCGAGCCCGC GGACATCCCG GCCCTGGCCG GGCACTACCT GGACGCGGTG 
CGCCAGTACC AGCCGCACGG CCCGTACCTG CTCGGTGGCT GGTCGATGGG GGGCACGTTG 
GCCCACGAGA TGGCCTGCCT GCTTGAACGG CGCGGTGAGA GCACCGCGCT GCTATTCATG 
ATCGATTCGA ACACGCCGGA CCGGATCAGG ACGCTGCATG GCCAGGGTGC TCCGCAGAAC 
ATCGCCGCGG TGCGCTACCT GCACTCGCTG GCGGCGTTCC TCGACCTGGA CCTCGGGTTC 
GGCCCGACCG AGGAAGCCGA GCTTCACGGC CGTACCGGCG ACGAGATCCG TCGGGCCGTC 
ACACAGCGGC TGCGCGACGT CGGCCTGTTG AGCCAGCGGG ACACCGCCGA CCTTCGGCTG 
CGGGTGTTCG AGCGGCACCT GCGGATGCTC GGAGAGCACC AGGCGGGCCA CCTGAGCGAT 
CCGGCGACCC GGCTGCTCCT CGTCCGGGCC GCGCTGCCGT CGCCCCGCAA CAGCGGTGTG 
GGCATGGGCG TGGACGACGC GCCTGACCTG CCCGGCCTCG GTTGGGACGG CCACGTACAC 
GGCCCGATAC GCGAGGTGGC CGTCGAAGGG CACCACTACT CGCTGCTCAC CGGGGGCGCC 
GTCACGACGA TCGCCAAACA CCTCAACGAG ACCCTCGCGG CGCTGCCGCA TCCGCTCCGA 
CAAACAACCG ATTACTCCTA A 

 

Protein sequence

MNTVESPDSS LIAVTALDCR FPGAPDTEAF WDLLLSERHG LTRHTLDELT ERGVPPRLRE 
HPAYVPVGGV IDDQDRFDPE PFGLTDTEAA LMDPQQRLFL EACWRALEAA GHGNGIGAGA 
VGVFAGAAHS DYLMRNLAHR YTSAASDPVG SLQTAMATVG DYLPLQVAHR LGLTGPAIAV 
NTTCSTSLVA VHLAAQSLLA GECDTALAGG ASLIVPQGLG YLYVPDGIFS IDGLVRAFSA 
DGTGIVHSQG VGVAVLRRLA DARADGDPVL AVLHGSAVNN DGADKTGFTA PSPRGQARVI 
TEALAVAGVE ARQISYVEAH GTATRLGDVV EISALRRVFG SAGPAWCALG SVKSNIGHAN 
SAAGIAGFAK TVLALHHGVL PATLDAEPLN PELHLDDSPF TVARRTADWP GTRYAGVSSF 
GIGGTNCHIV LGSAPAVSTP EPDPRPQLVL LSATSDAALA ESVTDVADTV HTTTVAPADL 
AYTLHSGRPI RRHRVAAVVT GDRVGDSVAL RTAVRRAAGA SMPKVVFVFP GAGTQYPGMG 
RGLMADEPEF ADTVRECGAL FDEPGRPRLT ELIEADRADP AALRLARDPA YGLPALFTVS 
LATARVLIRW GIRPDVVVGH SLGEYVAAVV AGALSVADAA ALVRVRSRGM SRTAGQGAML 
VVALSETEVV TLLTDHPDVD LAAVNAPTSC LVSGAEEAVA VLEARLVAKG VQTTRLRLDA 
GAHSRLVDPV LPELRAAASD VDARTPLVPL ASTLTGGFLT SAPAAGHWAP HLRSVVRFSD 
ALTTAIGDGP AVVVQTGPGS GLLQLARQHP AVQLAATIAT FPEPDEPGDE RATLLAATGD 
LWTWGVGISA EALHRSGRRR VMLPGHPFDR RRLWIDPPEP EAVPTADAPD ENEPFQVPVW 
LRVPMPDDSA AITGRWLLDG PEGDPLVEAI RMYLGAAGAQ VIDRAEVAAD ATIPCAGVVV 
LDLAPDGDDP AARVTGAVLR HAELARLTAT WAHDSCLLHV TRAAQQVESS DRPNPASAAG 
TAVPRVLAQE FPGLRWRTVD LPVVGPPDEL ACRVAEEAVD LVTGDLTGAE VALRGRHRWL 
RTVNPWRPRS EGPTDRMDAG TALLIGGLGD VGLTMAEHLA ERGWQVVVTG RTGLPLNAAP 
DSPAAARLEA VRRLTDRGLP VEVRAVDAGD PEATGALLRD IVDRFGRVDL VVHGAGVVAS 
TAVSPLRAVD PEAARGHARA KVSAAVALRR ALVELPEEAR PHTVMLMSSA TTLVGGLGLA 
PYAAANRYLD ALAEHQGTAG GTVWLSVAWD GWRVGPGGTE RAVASRHSIG RRDGMRALDR 
LRALTSRGRA PALVAVSPAE LRPRLSGEAV DARRQVASGM RNGVAENGAR GDAEATLAKV 
WSELLGFDVS DRDADFFALG GHSLLATRML ARLRDEHGVQ LRLQDLLARP TVASLAALLP 
TADESDPTGD TGPSAGTASP AGPEFAEAGP NGDGPREFPL TRVQHAYWVG GSGGYRLGDV 
PCSFHLEHDC PGLDVARYED AWNAVIARHP MLRAIITPEG RNRILDRVPR YRIRVRDLSA 
LDEPVRLEKL ARIRAEMVGR EPRPGRWPLV DIRAARLPGG IVRLFVNVDV LVCDTASFLL 
WDRELRALYE DPHVELPRVG TTFAACVAAL ERRAHSPERE RAARYWRDRL ERLPGAPALP 
VRPAQPGIRP RFVRRTARLE PAQWQALRAE AARRSLTPTA VLLAAYGDAL AVWSRQGRFA 
ITLTLFDRPP VHPDVNLVVG DFTSLLLHEV DRSRPGTFAD DAGEAQRTLF RDLDHREFSA 
LEALAEKSAR SGVTESVPVV FTSALGLTDP LGGEHDLDWM GKPVYGISST PQTWLDHQVI 
EQHGALLLQW DVLENVLPAD EADEAFSGYV DRVRRLAGEA EEWDAPRPAG PSAAGQSAPT 
GPPPGEPASS GETALLLRGG TAEPPLFLIH PSGGDVLCYG ELVGLLTDDR PVVGLTDPAL 
TGGVEPADIP ALAGHYLDAV RQYQPHGPYL LGGWSMGGTL AHEMACLLER RGESTALLFM 
IDSNTPDRIR TLHGQGAPQN IAAVRYLHSL AAFLDLDLGF GPTEEAELHG RTGDEIRRAV 
TQRLRDVGLL SQRDTADLRL RVFERHLRML GEHQAGHLSD PATRLLLVRA ALPSPRNSGV 
GMGVDDAPDL PGLGWDGHVH GPIREVAVEG HHYSLLTGGA VTTIAKHLNE TLAALPHPLR 
QTTDYS