Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2585 |
Symbol | |
ID | 5059048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2905063 |
End bp | 2905971 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640474841 |
Product | ABC transporter related |
Protein accession | YP_001159407 |
Protein GI | 145595110 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.557459 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACGG CAATCGACAT TCAGCGCATC GATAAGCGCT TCGGCCGCAT CAGGGCACTG GACGGTCTCG ACCTGCAGGT CGAGACCGGC ACCGTGCACG GCTTCCTCGG CCCCAACGGC GCCGGCAAGT CCACCACCAT CCGAATCCTG CTGGGGCTGC TCCGTGCCGA CCGCGGCCGG GTTCGGCTGC TCGGTGGTGA TCCGTGGGGC GACGCGGTGC GACTGCACCG CCGGCTCGCC TACGTCCCCG GCGACGTGGA ACTGTGGCCC AACCTGACCG GCGGCGAAGC GATCGACCTC TTCGCCCGCC TGCGCGGCGG GACCGACCCG GTTCGCCGCG ACGAGCTGTG CCAACGCTTC GACCTCGACC CCCGCAAGAA GGGGCGGACC TACTCGAAGG GCAACCGGCA GAAGGTCGCC CTGATCGCGG CGCTGGCCAG CGACGTGGAC CTGCTGCTGC TCGACGAGCC GACCGCTGGG CTGGACCCGC TGATGGAGGC GGTGTTTCAG GAGTGCATCC GGGAGGCCCG CGCGGCCGGC CGGACCGTTC TGCTCTCCAG CCACATCCTT GCCCAGGTCG AGGTGCTGGC CGACCAGATC TCGATCATCC GGCAGGGGCG GATCGTCGAG ACCGGCTCCC TGACCGACCT GCGTCACCTG ACCCGGACGT CCGTAGACGC GATCGTCGAC CAACCGGCCG CCTCGCTCGC CACCCTGGCC GGCGTATACG AGCTGCACGA CACCGACGGT CACGTCCGCT TCGAGGTCGA CGGCGATCAC CTCGCCGCCG TCATCCGGCG GCTGGGCGAC CTCGGTGTGC GCGGGCTGAC CGTCCGGCCA CCCACTCTGG AACAGCTGCT GCTGCGGCAC TACGGCGATG AGCCGGCCCG GCACGGGGTG GTGGCGTGA
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Protein sequence | MTTAIDIQRI DKRFGRIRAL DGLDLQVETG TVHGFLGPNG AGKSTTIRIL LGLLRADRGR VRLLGGDPWG DAVRLHRRLA YVPGDVELWP NLTGGEAIDL FARLRGGTDP VRRDELCQRF DLDPRKKGRT YSKGNRQKVA LIAALASDVD LLLLDEPTAG LDPLMEAVFQ ECIREARAAG RTVLLSSHIL AQVEVLADQI SIIRQGRIVE TGSLTDLRHL TRTSVDAIVD QPAASLATLA GVYELHDTDG HVRFEVDGDH LAAVIRRLGD LGVRGLTVRP PTLEQLLLRH YGDEPARHGV VA
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