Gene Strop_2585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2585 
Symbol 
ID5059048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2905063 
End bp2905971 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content70% 
IMG OID640474841 
ProductABC transporter related 
Protein accessionYP_001159407 
Protein GI145595110 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.557459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACGG CAATCGACAT TCAGCGCATC GATAAGCGCT TCGGCCGCAT CAGGGCACTG 
GACGGTCTCG ACCTGCAGGT CGAGACCGGC ACCGTGCACG GCTTCCTCGG CCCCAACGGC
GCCGGCAAGT CCACCACCAT CCGAATCCTG CTGGGGCTGC TCCGTGCCGA CCGCGGCCGG
GTTCGGCTGC TCGGTGGTGA TCCGTGGGGC GACGCGGTGC GACTGCACCG CCGGCTCGCC
TACGTCCCCG GCGACGTGGA ACTGTGGCCC AACCTGACCG GCGGCGAAGC GATCGACCTC
TTCGCCCGCC TGCGCGGCGG GACCGACCCG GTTCGCCGCG ACGAGCTGTG CCAACGCTTC
GACCTCGACC CCCGCAAGAA GGGGCGGACC TACTCGAAGG GCAACCGGCA GAAGGTCGCC
CTGATCGCGG CGCTGGCCAG CGACGTGGAC CTGCTGCTGC TCGACGAGCC GACCGCTGGG
CTGGACCCGC TGATGGAGGC GGTGTTTCAG GAGTGCATCC GGGAGGCCCG CGCGGCCGGC
CGGACCGTTC TGCTCTCCAG CCACATCCTT GCCCAGGTCG AGGTGCTGGC CGACCAGATC
TCGATCATCC GGCAGGGGCG GATCGTCGAG ACCGGCTCCC TGACCGACCT GCGTCACCTG
ACCCGGACGT CCGTAGACGC GATCGTCGAC CAACCGGCCG CCTCGCTCGC CACCCTGGCC
GGCGTATACG AGCTGCACGA CACCGACGGT CACGTCCGCT TCGAGGTCGA CGGCGATCAC
CTCGCCGCCG TCATCCGGCG GCTGGGCGAC CTCGGTGTGC GCGGGCTGAC CGTCCGGCCA
CCCACTCTGG AACAGCTGCT GCTGCGGCAC TACGGCGATG AGCCGGCCCG GCACGGGGTG
GTGGCGTGA
 
Protein sequence
MTTAIDIQRI DKRFGRIRAL DGLDLQVETG TVHGFLGPNG AGKSTTIRIL LGLLRADRGR 
VRLLGGDPWG DAVRLHRRLA YVPGDVELWP NLTGGEAIDL FARLRGGTDP VRRDELCQRF
DLDPRKKGRT YSKGNRQKVA LIAALASDVD LLLLDEPTAG LDPLMEAVFQ ECIREARAAG
RTVLLSSHIL AQVEVLADQI SIIRQGRIVE TGSLTDLRHL TRTSVDAIVD QPAASLATLA
GVYELHDTDG HVRFEVDGDH LAAVIRRLGD LGVRGLTVRP PTLEQLLLRH YGDEPARHGV
VA