Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2540 |
Symbol | |
ID | 5059003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2858745 |
End bp | 2859671 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640474796 |
Product | ABC transporter related |
Protein accession | YP_001159362 |
Protein GI | 145595065 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.913826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.404548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTTA TCGCAATCGA CGGACTGGTG AAGAGATTCG GTTCGGTCCG CGCGCTTGAC GGGCTCGACC TACAGGTGGA GGCGGGGGAG GTGCACGGCT TCCTCGGGCC CAACGGCTCC GGAAAGTCCA CCACCATCCG CGTCCTGCTC GGGCTGCTGC GCAGTGACGC CGGCAATGTC CGGCTGCTCG ATGGTGACCC GTGGCGCGAC GCGGTGGCGC TGCACCGCCG ACTCGCCTAC GTGCCGGGCG ACGTGAACCT GTGGCCCAAC CTCTCCGGCG GGGAGGCGAT CGACCTGTTC GGAGCGCTGC GCGGTGGCCT GAACCACCGT CGTCGGGACG AGCTGCTGGA ACGCTTCGAC CTCGATCCGA CCAAGAAGTG CCGGGCCTAC TCCAAGGGCA ACCGGCAGAA GGTCGCGATC GTCGCCGCCT TCGCCTCCGA CGTTGAGCTG TACGTGCTCG ACGAACCCAC CTCCGGGCTC GACCCGCTGA TGGAGGCGGT GTTCCAGGAA GAGGTACGGC GGCTCACCGG CAACGGCGCC ACGGTGCTGC TTTCCAGTCA CGTGCTCGCC GAGGTGGAGG CGCTCTGCGA CCGGGTCAGC ATCATCCGCG CCGGCCGTAC CGTCGAGTCC GGTTCCCTGA GCGATCTGCG GCACCTCGCC CGCACCACGG TCACCGTCGA GACGGTGCGT CCGCTGACCG GAGTCGCGGA GCTGCCCGGC GTGCACGAGG TCCGGGCCGT TGACGGCCGG GTCCGGTTGG AGGTTGAGCC GGAGCACCTC GACGCGCTGC TCGCCCACCT GATCCGCTTC GAGGTCCGGG CGTTGATGAG CGCACCGCCC ACCGTGGAGG AACTGTTCCT GCGGCACTAC GACGGGGCCG ACGACGGCCC GGCCGCCGCC GACAGCGGGG CGGAGCGGGC CCAGTGA
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Protein sequence | MPVIAIDGLV KRFGSVRALD GLDLQVEAGE VHGFLGPNGS GKSTTIRVLL GLLRSDAGNV RLLDGDPWRD AVALHRRLAY VPGDVNLWPN LSGGEAIDLF GALRGGLNHR RRDELLERFD LDPTKKCRAY SKGNRQKVAI VAAFASDVEL YVLDEPTSGL DPLMEAVFQE EVRRLTGNGA TVLLSSHVLA EVEALCDRVS IIRAGRTVES GSLSDLRHLA RTTVTVETVR PLTGVAELPG VHEVRAVDGR VRLEVEPEHL DALLAHLIRF EVRALMSAPP TVEELFLRHY DGADDGPAAA DSGAERAQ
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