Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2536 |
Symbol | |
ID | 5058999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2853948 |
End bp | 2854586 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640474792 |
Product | hypothetical protein |
Protein accession | YP_001159358 |
Protein GI | 145595061 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.107266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.384648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGGCG TTCCAACCGA TCCGAGCACC CTGCATCCGA TGCCCGAACG GCCACGTGTG GTGCTGTTGA AGCCACTGGT AGCCTCGCCA CTGATCGAAG TTGGGGAATT CACCTACTAC GACGACCCGG ACGATCCGAC CGCTTTCGAG GTTCGCAACG TTCTCTATCA CTTCGGGCCG GAGCGGCTGA TAATCGGAAA GTTCTGCGCG TTGGCCGAGG GCGTACGGTT CATCATGAAC GGCGCCAATC ACCGCATGGA CGGGCCCTCG ACCTTCCCGT TTCCGATTAT GGGTGGCTCC TGGAGCGAAC ACTTCGATCT CATCACCAAC CTGCCCGGGC GGGGTGACAC GGTGGTTGGT AACGACGTGT GGTTCGGCTA CCACACCATG ATTATGCCTG GTGTTCACAT CGGCAGCGGG GCGATCATTG CTGCTGGATC TGTGGTCGTC GACGATGTCC CCGCATATAG CATCGTCGGC GGCAACCCGG CCAGGGTGAT CCGCCGCCGC TTCCCCGAAG AAGACGTTGC CCGCCTGATG GCGGTTGCCT GGTGGGACTG GCCGCTGCAA CACATCACCG ATCACATCCG CACGATCATG TCCGGCAGTA TTGACGCCCT GGAGACCGTG GCGCCATAA
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Protein sequence | MTGVPTDPST LHPMPERPRV VLLKPLVASP LIEVGEFTYY DDPDDPTAFE VRNVLYHFGP ERLIIGKFCA LAEGVRFIMN GANHRMDGPS TFPFPIMGGS WSEHFDLITN LPGRGDTVVG NDVWFGYHTM IMPGVHIGSG AIIAAGSVVV DDVPAYSIVG GNPARVIRRR FPEEDVARLM AVAWWDWPLQ HITDHIRTIM SGSIDALETV AP
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