Gene Strop_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2536 
Symbol 
ID5058999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2853948 
End bp2854586 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content61% 
IMG OID640474792 
Producthypothetical protein 
Protein accessionYP_001159358 
Protein GI145595061 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.107266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.384648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCG TTCCAACCGA TCCGAGCACC CTGCATCCGA TGCCCGAACG GCCACGTGTG 
GTGCTGTTGA AGCCACTGGT AGCCTCGCCA CTGATCGAAG TTGGGGAATT CACCTACTAC
GACGACCCGG ACGATCCGAC CGCTTTCGAG GTTCGCAACG TTCTCTATCA CTTCGGGCCG
GAGCGGCTGA TAATCGGAAA GTTCTGCGCG TTGGCCGAGG GCGTACGGTT CATCATGAAC
GGCGCCAATC ACCGCATGGA CGGGCCCTCG ACCTTCCCGT TTCCGATTAT GGGTGGCTCC
TGGAGCGAAC ACTTCGATCT CATCACCAAC CTGCCCGGGC GGGGTGACAC GGTGGTTGGT
AACGACGTGT GGTTCGGCTA CCACACCATG ATTATGCCTG GTGTTCACAT CGGCAGCGGG
GCGATCATTG CTGCTGGATC TGTGGTCGTC GACGATGTCC CCGCATATAG CATCGTCGGC
GGCAACCCGG CCAGGGTGAT CCGCCGCCGC TTCCCCGAAG AAGACGTTGC CCGCCTGATG
GCGGTTGCCT GGTGGGACTG GCCGCTGCAA CACATCACCG ATCACATCCG CACGATCATG
TCCGGCAGTA TTGACGCCCT GGAGACCGTG GCGCCATAA
 
Protein sequence
MTGVPTDPST LHPMPERPRV VLLKPLVASP LIEVGEFTYY DDPDDPTAFE VRNVLYHFGP 
ERLIIGKFCA LAEGVRFIMN GANHRMDGPS TFPFPIMGGS WSEHFDLITN LPGRGDTVVG
NDVWFGYHTM IMPGVHIGSG AIIAAGSVVV DDVPAYSIVG GNPARVIRRR FPEEDVARLM
AVAWWDWPLQ HITDHIRTIM SGSIDALETV AP