Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2522 |
Symbol | cbiD |
ID | 5058985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2835504 |
End bp | 2836646 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640474779 |
Product | cobalt-precorrin-6A synthase |
Protein accession | YP_001159345 |
Protein GI | 145595048 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0994742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTACG ACCTGCCGCC GTTACGCGAG CCGGACCTGC CACGCACCGC GAAGGTTCGG CCCGTGGCGC TGCGTACCGG CTGGACCACC GGGGCCTGCG CGACGGCCGC GACGAAGGCC GCGCTGACCG CCCTGGTCAC CGGCGTGTCA CCGGAGCAGG TCGAGATCGG ACTGCCGGCC GGGCGGCGGG TGTGCTTCCC GGTGGCGCGC TGCGACCGTA CGGCTGACGG CGTCGAGGCG GTGGTGGTCA AGGACGCCGG CGACGACCCG GACGTCACCC ACGGTGCCGA ACTGACCGCC ACGGTCGGCT GGCGGTGGGT CCCCGGACTG GCCCTGGAGG GCGGGCCCGG GGTGGGCACG GTGACGAAGC CGGGGCTGGG GCTGACGGTC GGCGGACCAG CGATCAACGA CACCCCGCGT CGGATGATCG GCGAGGCGGT TGCCGAGGTG GTTGACCTGG CCGTCGTCGG CGTCCGAGTG GTGATCAGCG TCCCGCGCGG CGAGATCATG GCCCGGAAGA CGACGAACCG TCGGCTCGGC ATCATCGGCG GCATCTCGAT TCTCGGTACG ACCGGTGTGG TCAGACCCTT CTCCACCGCG TCCTGGCGGG CCAGCGTCGT GCAGGCCGTC CAGGTGGCGG CCGCTCAGGG GGAGCAGACG GTGGTGCTGT GCACGGGCGG GCGGACCGAG CGGGCCGCCC GGGAGCTGCT GCCGGAGCTG CCCGAGGTGT GCTTCGTGGA GGTTGGTGAC TTCACCGGCG CGGCGGTCAC CGCCGCGGTC ACCCACGGCC TGTCCGGGGT GGCCTTCGTC GGCATGGCGG GCAAGCTGGC CAAGCTCGCC GCCGGCGTCC TGATGACCCA CTACACCCGC TCCAAGGTGG ACTTGTCGCT TCTCGGTGCC GTCACCGTCG AGGCGGGCGG CAGCGCTGAC CTGGCCGCCG CCGTCACCGC CGCCAACACC GGGCGGCACG CGTACGAACT GTGGGAGGCC GCCGGCCTGC TCGGCCCCGC CGGCGACCTG CTCTGCCGTC GGGTCCGCAC GGTGCTGCGC CGTTTCGCCG GGGACGCCGT CACCGTCGAT GTGGCGATGG TCGACTTCGC CGGGGCGCGG CGCGTGGCCG CGAGCGGGCG GTGGTCCCAA TGA
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Protein sequence | MTYDLPPLRE PDLPRTAKVR PVALRTGWTT GACATAATKA ALTALVTGVS PEQVEIGLPA GRRVCFPVAR CDRTADGVEA VVVKDAGDDP DVTHGAELTA TVGWRWVPGL ALEGGPGVGT VTKPGLGLTV GGPAINDTPR RMIGEAVAEV VDLAVVGVRV VISVPRGEIM ARKTTNRRLG IIGGISILGT TGVVRPFSTA SWRASVVQAV QVAAAQGEQT VVLCTGGRTE RAARELLPEL PEVCFVEVGD FTGAAVTAAV THGLSGVAFV GMAGKLAKLA AGVLMTHYTR SKVDLSLLGA VTVEAGGSAD LAAAVTAANT GRHAYELWEA AGLLGPAGDL LCRRVRTVLR RFAGDAVTVD VAMVDFAGAR RVAASGRWSQ
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