Gene Strop_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2505 
Symbol 
ID5058968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2814637 
End bp2816337 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content73% 
IMG OID640474763 
Productacetyl-CoA carboxylase, carboxyl transferase, beta subunit 
Protein accessionYP_001159329 
Protein GI145595032 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit
[COG0825] Acetyl-CoA carboxylase alpha subunit 
TIGRFAM ID[TIGR00513] acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.711291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGA CCACGCCCCG TGGCGGGCAG CTCTGGTCAC GCTGCGGCGG CTGCGCCAGC 
CTGCTGTATC GCAAGCGGCT GCGGCGAAAC CTGGACGTGT GCCCGGAGTG CGGTGCCCAC
TCCCGGCTCG ACGCGCCGGC CCGCTTGGCC CAGCTGGTGG ACCCCGGGTC GTTTACCGCC
CTCGCCGACC GGGCGCCGGA GGTTGATCCG ATCGGCTTCG TCGATGTGCT CCCCTACCCC
CACCGGCTCA CCGCCGCGCG GAGCGGCACT GGGCTGGCCG AGGCGGTCGT CTGCGGCACC
GCCACAGTGG CCGGGAGCCG CTGCGTGATC GCCGTCATGG ACTTCCGTTT CCTCGGCGGC
AGCCTCGGTT GCGCGGTCGG AGAGCTGATC ACCCAGGCTG CCGAACGTGC TCTCGCCGAC
CGAGTTCCGC TGGTGGTGGT GACCGCCTCT GGCGGAGCGC GGATGCAGGA GGGCGTGCTG
TCGCTGATGC AGATGGCGAC GGTCAGCCAG GCGGTCGCCG CGTTGCGCGA GTCCGGGGTG
CCGAGTGTCA GCGTGCTCAC CGATCCCACG TACGGCGGTG TCGCCGCCTC GTTCGCCACC
AACACCGACG TGGTGATCGC CGAGAGTGGG GCCCGGATGG GTTTCGCCGG GCCCCGGGTG
ATTCGCCAGG TCACCGGCCG GGAGTTGCCT GACGGGTTCC AGACCGCCGA GTTTCTGCTG
CGGCACGGCC AGGTCGACCT GGTGGTACCC CGGCATGCTC TGCGCGGTTG TCTCGCCACG
CTGCTCGCTG CCGCATCCGG CGGGCGCGAA CCGGTGGGCG CCGGGCACGA GTCGGAGTGC
CCACCCGTGG ACGGCTCATC GACACAGGAG CGTGGTGCGG ACAAGCGGGA CGCCTGGGAG
ACGGTTCGGC TGGCCCGGCA TCCGGGCCGC CCGACCACGC TGGACTATCT GGAGACGGCC
TTTGACAGCT TCGTCGAGCT GCACGGCGAC CGGCTGGGCG CCGACTGCCC GGCGGTCGTC
GGCGGACTGG CCGAACTGGC CGGCCGGCCG GTCCTGGTGG TCGGTCACCA GAAGGGCCAC
ACCACCGGCG ACCTGATGTC CCGCAACTTC GGAATGGCGA GTCCGGCCGG GCACCGGAAG
GCGCTCCGGC TGGCTCGGCT GGCCGCGCGG TGGGGGCTGC CCGTCGTCAC CCTCGTGGAC
ACCCCCGGTG CCGACCCGGG AGTGGGCGCG GAGGAACAGG GCCAGGCCGC GGCGATCGCG
GAGAACATCC TGACCCTGAC GATGTTGCCC ACCCCGGTCG TTGCGGTGAT CACCGGCGAG
GGCGGCAGCG GCGGCGCGCT GGCGCTCGCG GTCGCCGACC GGGTGCTGAT GTTGGAACAT
GCCGTCTACT CGGTCATCAG TCCGGAGGGG TGCGCCGCGA TTCTCTGGCC AGACCGGTCC
GCAGCCCCGC AGGCGGCCCG CGCGCTGCGG CTGACCAGCG CCGACCTCTG TCGTCTGGGG
GTGGTGGACG CGGTGGTCCC CGAACCGGCA CCGGCCGCGC ATCACGACCC GCCGGCCGCC
ATGCAGGCGG TGCGGGAGGC GGTACTGGCG CACCTGGTGC CGTTGCTCGA GGTGCCCACC
GCGACCCTGG TTCGGCGTCG CAGGCGCCGG TTCCGTCGGT TCGGTGCCGC CGGCCTCGGA
GCCCGGGCAG GTGCCCGATG A
 
Protein sequence
MNPTTPRGGQ LWSRCGGCAS LLYRKRLRRN LDVCPECGAH SRLDAPARLA QLVDPGSFTA 
LADRAPEVDP IGFVDVLPYP HRLTAARSGT GLAEAVVCGT ATVAGSRCVI AVMDFRFLGG
SLGCAVGELI TQAAERALAD RVPLVVVTAS GGARMQEGVL SLMQMATVSQ AVAALRESGV
PSVSVLTDPT YGGVAASFAT NTDVVIAESG ARMGFAGPRV IRQVTGRELP DGFQTAEFLL
RHGQVDLVVP RHALRGCLAT LLAAASGGRE PVGAGHESEC PPVDGSSTQE RGADKRDAWE
TVRLARHPGR PTTLDYLETA FDSFVELHGD RLGADCPAVV GGLAELAGRP VLVVGHQKGH
TTGDLMSRNF GMASPAGHRK ALRLARLAAR WGLPVVTLVD TPGADPGVGA EEQGQAAAIA
ENILTLTMLP TPVVAVITGE GGSGGALALA VADRVLMLEH AVYSVISPEG CAAILWPDRS
AAPQAARALR LTSADLCRLG VVDAVVPEPA PAAHHDPPAA MQAVREAVLA HLVPLLEVPT
ATLVRRRRRR FRRFGAAGLG ARAGAR