| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2439 |
|---|
| Symbol | |
|---|
| ID | 5058902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 2741906 |
|---|
| End bp | 2742469 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640474698 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159264 |
|---|
| Protein GI | 145594967 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.397369 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCTACC AGGAGCAGAT TCCCGACCTC GGTGAGCTGA CGCTGGAGCC GGTGCACCCC
GACCGGCACG CCGAACTGCT GCACGGCTGG GTGACCTTGC CCCGTAACGA GTTCTGGGGC
ATGGGGTCGC ACACGCTTGA CCAGGTGCGC GAGATCTACG CGTTCCTCGA CGGGTTGGAC
ACCCATCACG CGTACCTGAT TCTGCTGGAC GGCGAGCCGG TGGGGCTGTT CCAGACCTAC
CAGCCGGAGG CGGACCCGGT GGGGGAGCGC TATGCGGTGC AGGCGGGGGA CATGGGGATG
CACCTGCTGC TCAACCCACC ACGGCGCTAC CTTCGCGGCA TCACCACGGC CGTCGGCCCG
GTGCTGGTCA GGTTTCTGCT GCAAGATCCG GCCACACAGC GCATCGTGGT GGAGCCGGAT
GTGCGCAACG AGGCCGCGCT GCACCGGCTG CGGATCGAAG GATTCATCTT GGCCGCGGAG
ATTGACATGC CCGACAAGCG GGCCCAGTTG GCATTCTTGA CCCGAGCCCG GTTTGAGGCC
GATCACCCGA CCCCGGTGGG ATAG
|
|---|
| Protein sequence | MIYQEQIPDL GELTLEPVHP DRHAELLHGW VTLPRNEFWG MGSHTLDQVR EIYAFLDGLD
THHAYLILLD GEPVGLFQTY QPEADPVGER YAVQAGDMGM HLLLNPPRRY LRGITTAVGP
VLVRFLLQDP ATQRIVVEPD VRNEAALHRL RIEGFILAAE IDMPDKRAQL AFLTRARFEA
DHPTPVG
|
|---|
| |